RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 C2CD4CQ8TF44 421 aa10.09□□□□□ -0.79
ACER3-201ENST00000278544 CLEC5AQ9NY25 188 aa10.09□□□□□ -0.79
ACER3-201ENST00000278544 NAT8Q9UHE5 227 aa10.09□□□□□ -0.79
ACER3-201ENST00000278544 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 ZNF738Q8NE65 137 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 C20orf173Q96LM9 149 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 LCN12Q6JVE5 192 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 S100A7AQ86SG5 101 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 LINC01551Q86U37 167 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 C4orf3Q8WVX3 66 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 MLXQ9UH92 298 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 FAM3BP58499 235 aaPredicted RBP10.08□□□□□ -0.8
ACER3-201ENST00000278544 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 KLK9Q2XQG4 91 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 C10orf91Q5T1B1 145 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 C16orf54Q6UWD8 224 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 ZNF331Q9NQX6 463 aaPredicted RBP10.08□□□□□ -0.8
ACER3-201ENST00000278544 TMEM14CQ9P0S9 112 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
ACER3-201ENST00000278544 MYOZ3Q8TDC0 251 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 DYNLRB2Q8TF09 96 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 GRAMD2BQ96HH9 432 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 OTORQ9NRC9 128 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 TSSC4Q9Y5U2 329 aaPredicted RBP10.07□□□□□ -0.8
ACER3-201ENST00000278544 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 CSN1S1P47710 185 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 Q6ZQT7 251 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 UFC1Q9Y3C8 167 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
ACER3-201ENST00000278544 TRAV8-2A0A0B4J237 113 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 A0A1W2PS18 150 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 PSMG4Q5JS54 123 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 OR9G4Q8NGQ1 327 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 ATG101Q9BSB4 218 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 MUC21A0A0G2JKD1 596 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 MUC21A0A140T8X8 626 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 PF4P02776 101 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 MYCNOSP40205 109 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 MUC21Q5SSG8 566 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 ZNF580Q9UK33 172 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 SAP30O75446 220 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
ACER3-201ENST00000278544 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
ACER3-201ENST00000278544 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
ACER3-201ENST00000278544 MGAM2Q2M2H8 2515 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 DIRC3C9JPN6 131 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 HIST1H1AQ02539 215 aaPredicted RBP10.05□□□□□ -0.8
ACER3-201ENST00000278544 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 LINC00322Q6ZN03 302 aaPredicted RBP10.05□□□□□ -0.8
ACER3-201ENST00000278544 C1QL4Q86Z23 238 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 TPPP3Q9BW30 176 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 MS4A6AQ9H2W1 248 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 U3KQE9 123 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 TMEM89A2RUT3 159 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 GZMBP10144 247 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 RBPMS2Q6ZRY4 209 aaKnown RBP10.05□□□□□ -0.8
ACER3-201ENST00000278544 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 TMEM75Q8N9X5 138 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 OR4B1Q8NGF8 309 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 SUN5Q8TC36 379 aa10.05□□□□□ -0.8
ACER3-201ENST00000278544 PMS2P11Q13670 270 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 ARL2-SNX15V9GYD0 113 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 M0QZ24 198 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 BRI3O95415 125 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 FXYD7P58549 80 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 KRTAP24-1Q3LI83 254 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 A0A1W2PPQ1 181 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 FLI1Q01543 452 aaPredicted RBP10.04□□□□□ -0.8
ACER3-201ENST00000278544 CD300EQ496F6 205 aaPredicted RBP10.04□□□□□ -0.8
ACER3-201ENST00000278544 PRIMA1Q86XR5 153 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 PSG8Q9UQ74 426 aa10.04□□□□□ -0.8
ACER3-201ENST00000278544 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 H7BYZ3 331 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 PSG9Q00887 426 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
ACER3-201ENST00000278544 OVOL1O14753 267 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 SPRY2O43597 315 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 IGLV2-8P01709 118 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
ACER3-201ENST00000278544 ADARB2-AS1A8MUL3 147 aa10.02□□□□□ -0.8
ACER3-201ENST00000278544 SFRP2Q96HF1 295 aa10.02□□□□□ -0.8
ACER3-201ENST00000278544 ZNF705GA8MUZ8 300 aaPredicted RBP10.02□□□□□ -0.81
ACER3-201ENST00000278544 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
ACER3-201ENST00000278544 IGLV2-11P01706 119 aa10.02□□□□□ -0.81
ACER3-201ENST00000278544 FRMD6-AS1P0C7T7 363 aa10.02□□□□□ -0.81
ACER3-201ENST00000278544 C1orf194Q5T5A4 169 aa10.02□□□□□ -0.81
ACER3-201ENST00000278544 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
ACER3-201ENST00000278544 IGF2BP2-AS1Q96M15 143 aa10.02□□□□□ -0.81
ACER3-201ENST00000278544 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms