RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CD99P14209 185 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 KHDC1LQ5JSQ8 128 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 TEX38Q6PEX7 206 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 KLHDC1Q8N7A1 406 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 URGCP-MRPS24S4R325 110 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 DEFB1P60022 68 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 C19orf24Q9BVV8 132 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.96□□□□□ -0.97
SSRP1-201ENST00000278412 IGLC2P0DOY2 106 aa8.96□□□□□ -0.97
SSRP1-201ENST00000278412 PMS2P11Q13670 270 aa8.96□□□□□ -0.97
SSRP1-201ENST00000278412 ADIRFQ15847 76 aa8.96□□□□□ -0.97
SSRP1-201ENST00000278412 IGHV4OR15-8A0A075B7B6 117 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 A0A087WW49 117 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 PGPA6NDG6 321 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 OR5I1Q13606 314 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 IQCJQ1A5X6 159 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 RNF182Q8N6D2 247 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 RNASE8Q8TDE3 154 aaKnown RBP8.96□□□□□ -0.98
SSRP1-201ENST00000278412 TXN2Q99757 166 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 Q9H3A6 140 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM167BQ9NRX6 74 aa8.96□□□□□ -0.98
SSRP1-201ENST00000278412 ZNF705FA8MVS1 300 aaPredicted RBP8.95□□□□□ -0.98
SSRP1-201ENST00000278412 OR8I2Q8N0Y5 310 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 RABAC1Q9UI14 185 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 K7EN84 100 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 TCF21O43680 179 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 BUB3O43684 328 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 MYCNOSP40205 109 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 Q8N2B8 174 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 TVP23CQ96ET8 276 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 NIPSNAP3BQ9BS92 247 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 AGRNO00468 2067 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 B4DEV8 164 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 ISLRO14498 428 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 RPL23P62829 140 aaKnown RBP8.95□□□□□ -0.98
SSRP1-201ENST00000278412 SDF2L1Q9HCN8 221 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM242Q9NWH2 141 aa8.95□□□□□ -0.98
SSRP1-201ENST00000278412 TRBV24-1A0A075B6N3 115 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 SLURP1P55000 103 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 RNF2Q99496 336 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 ZFP30Q9Y2G7 519 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 COL6A5A8TX70 2615 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 TRBV19A0A075B6N1 114 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM250H0YL14 139 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 SLC25A5P05141 298 aaKnown RBP8.94□□□□□ -0.98
SSRP1-201ENST00000278412 CD28P10747 220 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 LINC01006Q8NI28 216 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 USMG5Q96IX5 58 aa8.94□□□□□ -0.98
SSRP1-201ENST00000278412 PEF1Q9UBV8 284 aaKnown RBP8.94□□□□□ -0.98
SSRP1-201ENST00000278412 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 SIGLEC15Q6ZMC9 328 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 BPIFA4PQ86YQ2 179 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 K7EP13 123 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 HIST1H1EP10412 219 aaKnown RBP8.93□□□□□ -0.98
SSRP1-201ENST00000278412 HILS1P60008 231 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 CENPWQ5EE01 88 aa8.93□□□□□ -0.98
SSRP1-201ENST00000278412 PRSS47A8MTI9 375 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 H3BUA1 57 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 PDE6DO43924 150 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 PKD1L1Q8TDX9 2849 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 PRAC2D3DTV9 90 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 ZNF705DP0CH99 300 aaPredicted RBP8.92□□□□□ -0.98
SSRP1-201ENST00000278412 ZNF705BP0CI00 300 aaPredicted RBP8.92□□□□□ -0.98
SSRP1-201ENST00000278412 GOLT1AQ6ZVE7 132 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 MYOZ3Q8TDC0 251 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM18Q96B42 140 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 CDC42EP3Q9UKI2 254 aa8.92□□□□□ -0.98
SSRP1-201ENST00000278412 A0A0G2JLM5 398 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 PEX7O00628 323 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
SSRP1-201ENST00000278412 FOXE3Q13461 319 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 GPHB5Q86YW7 130 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 GBGT1Q8N5D6 347 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 SRD5A3Q9H8P0 318 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM14CQ9P0S9 112 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 IGKV2-40A0A087WW87 121 aaPredicted RBP8.91□□□□□ -0.98
SSRP1-201ENST00000278412 CLDN34H7C241 214 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 IGKV2D-40P01614 121 aaPredicted RBP8.91□□□□□ -0.98
SSRP1-201ENST00000278412 IGLV2-8P01709 118 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 HOXD3P31249 432 aaPredicted RBP8.91□□□□□ -0.98
SSRP1-201ENST00000278412 KRTAP10-3P60369 221 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 SLC35B1P78383 322 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 ZNF705AQ6ZN79 300 aaPredicted RBP8.91□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM86BQ8N661 226 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 OR4F17Q8NGA8 305 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM190Q8WZ59 177 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 C11orf52Q96A22 123 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 METTL26Q96S19 204 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 CITED2Q99967 270 aaPredicted RBP8.91□□□□□ -0.98
SSRP1-201ENST00000278412 EPDR1Q9UM22 224 aa8.91□□□□□ -0.98
SSRP1-201ENST00000278412 HELTA6NFD8 242 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 CIDEAO60543 219 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 PRR31Q5SQ13 230 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms