RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 CFHR2P36980 270 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 DYSFO75923 2080 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 GTF3C1Q12789 2109 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 GHRHP01286 108 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 LYPD1Q8N2G4 141 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 WDR86Q86TI4 376 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 PRIMA1Q86XR5 153 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 C1orf194Q5T5A4 169 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 RASL11AQ6T310 242 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 RASL10AQ92737 203 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 HEATR5AQ86XA9 2040 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 LY6G6EA0A0G2JKS1 128 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 TPSG1Q9NRR2 321 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 U3KQA8 63 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
USP53-201ENST00000274030 SPOCK3Q9BQ16 436 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 SSC4DQ8WTU2 575 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 Q96MF0 132 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
USP53-201ENST00000274030 TNFRSF6BO95407 300 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 UBE2E1P51965 193 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 RSPO3Q9BXY4 272 aaPredicted RBP9.21□□□□□ -0.93
USP53-201ENST00000274030 TRAV12-2A0A075B6T6 113 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 GAGE12JA6NER3 117 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 GAGE1Q13065 139 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 GAGE4Q13068 117 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 GAGE5Q13069 117 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 TTC28Q96AY4 2481 aa9.21□□□□□ -0.93
USP53-201ENST00000274030 MMP23AO75900 390 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 DIAPH2-AS1Q14236 149 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 LY96Q9Y6Y9 160 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 MALRD1Q5VYJ5 2156 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 RNF166Q96A37 237 aaPredicted RBP9.21□□□□□ -0.94
USP53-201ENST00000274030 SBF1O95248 1867 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.21□□□□□ -0.94
USP53-201ENST00000274030 SIGMAR1Q99720 223 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 TMEM14BQ9NUH8 114 aa9.21□□□□□ -0.94
USP53-201ENST00000274030 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
USP53-201ENST00000274030 ZGRF1Q86YA3 2104 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 LYL1P12980 280 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 OCIAD2Q56VL3 154 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 IGHV1-69P01742 117 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 C17orf58Q2M2W7 97 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 LOXP28300 417 aaPredicted RBP9.2□□□□□ -0.94
USP53-201ENST00000274030 MST1LQ2TV78 715 aa9.2□□□□□ -0.94
USP53-201ENST00000274030 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 ARTNQ5T4W7 220 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 F5H768 121 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 ESDP10768 282 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 PAX9P55771 341 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 ZNF48Q96MX3 618 aaPredicted RBP9.19□□□□□ -0.94
USP53-201ENST00000274030 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 IGLV3-9A0A075B6K5 115 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 IGKV1-39P01597 117 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 IGKV1D-39P04432 117 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 FAM110DQ8TAY7 271 aaPredicted RBP9.19□□□□□ -0.94
USP53-201ENST00000274030 C1orf147Q96MC9 270 aaPredicted RBP9.19□□□□□ -0.94
USP53-201ENST00000274030 LMO1P25800 156 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 LY6G5BQ8NDX9 201 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 TP53TG1Q9Y2A0 90 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
USP53-201ENST00000274030 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 IGFBPL1Q8WX77 278 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 ZNF134P52741 427 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 CR1LQ2VPA4 569 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 MRPL27Q9P0M9 148 aaKnown RBP9.18□□□□□ -0.94
USP53-201ENST00000274030 ITGB1BP1O14713 200 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 SPG11Q96JI7 2443 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 WT1-ASQ06250 92 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 PDE6HQ13956 83 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
USP53-201ENST00000274030 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 GATA4P43694 442 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 SS18Q15532 418 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 TEX36Q5VZQ5 186 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 GAGE12BA1L429 117 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 VWC2LB2RUY7 222 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 LEPROTO15243 131 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 NDUFS7O75251 213 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 GAGE7O76087 117 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 RSPO1Q2MKA7 263 aaPredicted RBP9.17□□□□□ -0.94
USP53-201ENST00000274030 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 TRBV19A0A075B6N1 114 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 IGHV2-70DA0A0C4DH43 119 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 NDUFS8O00217 210 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms