RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 Q6ZVH6 145 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 CHD3Q12873 2000 aaKnown RBP8.6□□□□□ -1.03
OTOF-201ENST00000272371 TIMM23O14925 209 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 PTPRDP23468 1912 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 CYYR1Q96J86 154 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 SAP30O75446 220 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 FAM27E3Q08E93 113 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 MRPL51Q4U2R6 128 aaKnown RBP8.6□□□□□ -1.03
OTOF-201ENST00000272371 V9GYV3 84 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 CACNA1DQ01668 2161 aa8.6□□□□□ -1.03
OTOF-201ENST00000272371 IGKV1-27A0A075B6S5 117 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 FOXF2Q12947 444 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 INTS1Q8N201 2190 aaKnown RBP8.59□□□□□ -1.03
OTOF-201ENST00000272371 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 SHISA9B4DS77 424 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 TIAF1O95411 115 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 ACYP1P07311 99 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 C9orf139Q6ZV77 190 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 KIR2DL5BA0A0G2JN68 375 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 KIR2DL5BA0A0G2JPC4 375 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 KIR2DL5AQ8N109 375 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 CRLF1O75462 422 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 NPYP01303 97 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 HLA-DRB4P13762 266 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 HLA-DRB4X5D2U9 266 aa8.59□□□□□ -1.03
OTOF-201ENST00000272371 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 DEFB125Q8N687 156 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 RNASE8Q8TDE3 154 aaKnown RBP8.58□□□□□ -1.04
OTOF-201ENST00000272371 SH2D6Q7Z4S9 175 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 A0A0G2JRQ6 117 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 CD59P13987 128 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 IL17RELQ6ZVW7 336 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 VWC2Q2TAL6 325 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 IGHG2P01859 326 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 SIGLEC8Q9NYZ4 499 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 MRPS18CQ9Y3D5 142 aaKnown RBP8.58□□□□□ -1.04
OTOF-201ENST00000272371 QRFPP83859 136 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 ALPK2Q86TB3 2170 aa8.58□□□□□ -1.04
OTOF-201ENST00000272371 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 WIPF3A6NGB9 483 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 FOXG1P55316 489 aaPredicted RBP8.57□□□□□ -1.04
OTOF-201ENST00000272371 NDPQ00604 133 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 TICRRQ7Z2Z1 1910 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 FANCMQ8IYD8 2048 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 MRPL35Q9NZE8 188 aaKnown RBP8.57□□□□□ -1.04
OTOF-201ENST00000272371 ATOX1O00244 68 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 VWA8A3KMH1 1905 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 LINC00473A8K010 186 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 CRYGSP22914 178 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 C3orf36Q3SXR2 165 aa8.57□□□□□ -1.04
OTOF-201ENST00000272371 RLFQ13129 1914 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 I3L3M4 83 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 CNOT1A5YKK6 2376 aaKnown RBP8.56□□□□□ -1.04
OTOF-201ENST00000272371 SVIPQ8NHG7 77 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 EP300Q09472 2414 aaPredicted RBP8.56□□□□□ -1.04
OTOF-201ENST00000272371 F8VRH5 84 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 MRPL23Q16540 153 aaKnown RBP8.56□□□□□ -1.04
OTOF-201ENST00000272371 H0YJW9 148 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 PFN2P35080 140 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 C7orf69Q9H7B7 122 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 hADV29S1A0JD25 119 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 EGR2P11161 476 aaPredicted RBP8.56□□□□□ -1.04
OTOF-201ENST00000272371 PDE6HQ13956 83 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 C5orf24Q7Z6I8 188 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 SCRT2Q9NQ03 307 aa8.56□□□□□ -1.04
OTOF-201ENST00000272371 FAM236AA0A1B0GUQ0 79 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 FAM236BA0A1B0GV22 79 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 YLPM1P49750 1951 aaKnown RBP8.55□□□□□ -1.04
OTOF-201ENST00000272371 RNASE2P10153 161 aaKnown RBP8.55□□□□□ -1.04
OTOF-201ENST00000272371 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 TRBV6-6A0A0A6YYG2 114 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 IGHV1-3A0A0C4DH29 117 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 ZNF726P1Q15940 193 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 MRPL14Q6P1L8 145 aaKnown RBP8.55□□□□□ -1.04
OTOF-201ENST00000272371 PNRC2Q9NPJ4 139 aaKnown RBP8.55□□□□□ -1.04
OTOF-201ENST00000272371 DKK2Q9UBU2 259 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 TRAV26-1A0A087WT03 109 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 A0A1B0GX51 115 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 PRSS22Q9GZN4 317 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 NDUFS7O75251 213 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 CEP250Q9BV73 2442 aa8.55□□□□□ -1.04
OTOF-201ENST00000272371 TMEM200BQ69YZ2 307 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 G3V4G9 280 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 KLRD1Q13241 179 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 Q6ZRM9 215 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms