RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IGLC2P0DOY2 106 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 FAUP35544 74 aaKnown RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 CDKN1BP46527 198 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 UBE2MP61081 183 aaKnown RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 B2MP61769 119 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 RHOBP62745 196 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 RPP30P78346 268 aaKnown RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 DLK1P80370 383 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 TMEM256Q8N2U0 113 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 SAT2Q96F10 170 aaPredicted RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 SMIM8Q96KF7 97 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 MGST2Q99735 147 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 ARL6Q9H0F7 186 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 RBM38Q9H0Z9 239 aaKnown RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 Q9H3A6 140 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 Q9H8V8 135 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 TIMM8BQ9Y5J9 83 aaPredicted RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 TRAV5A0A0B4J249 113 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 NDUFB6O95139 128 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 ANXA7P20073 488 aaKnown RBP6.16□□□□□ -1.42
TPM3-201ENST00000271850 FUSP35637 526 aaKnown RBP eCLIP6.16□□□□□ -1.42
TPM3-201ENST00000271850 CCL18P55774 89 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 AP3S2P59780 193 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 RAP2BP61225 183 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 OPCMLQ14982 345 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 RXFP4Q8TDU9 374 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 VSIG2Q96IQ7 327 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 TMPRSS5Q9H3S3 457 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 C11orf1Q9H5F2 150 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 DNAH8Q96JB1 4490 aa6.16□□□□□ -1.42
TPM3-201ENST00000271850 PIGBOS1A0A0B4J2F0 54 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 GAGE12BA1L429 117 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 C7orf66A4D0T2 115 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 FNDC10F2Z333 226 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 H7BYZ3 331 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 AGPAT2O15120 278 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 GAGE7O76087 117 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 OR4E1P0C645 316 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 GAGE12FP0CL80 117 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 GAGE12GP0CL81 117 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 GAGE12IP0CL82 117 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 CXCL2P19875 107 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 SELENOTP62341 195 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 TEPPQ6URK8 271 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 Q6ZQT7 251 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 ZNF493Q6ZR52 646 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 Q6ZTI0 123 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 C11orf72Q8NBR9 251 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 ZNF431Q8TF32 576 aaPredicted RBP6.15□□□□□ -1.42
TPM3-201ENST00000271850 DEDD2Q8WXF8 326 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 NPVFQ9HCQ7 196 aa6.15□□□□□ -1.42
TPM3-201ENST00000271850 A0A096LPF7 62 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 J3KRW8 73 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 TSC22D2O75157 780 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 MBPP02686 304 aaPredicted RBP6.14□□□□□ -1.43
TPM3-201ENST00000271850 BTF3P20290 206 aaKnown RBP6.14□□□□□ -1.43
TPM3-201ENST00000271850 M6PRP20645 277 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 OR5I1Q13606 314 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 LCN15Q6UWW0 184 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 GNPNAT1Q96EK6 184 aaPredicted RBP6.14□□□□□ -1.43
TPM3-201ENST00000271850 ZNF503Q96F45 646 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 FAM19A4Q96LR4 140 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 C20orf144Q9BQM9 153 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 SLC50A1Q9BRV3 221 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 ZNF586Q9NXT0 402 aa6.14□□□□□ -1.43
TPM3-201ENST00000271850 MRPS16Q9Y3D3 137 aaKnown RBP6.14□□□□□ -1.43
TPM3-201ENST00000271850 TRAV12-3A0A0B4J271 114 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 M0R3E3 92 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 CCSO14618 274 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 NDUFB4O95168 129 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 SCGB1D2O95969 90 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 LINC00315P59091 139 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 TAS2R30P59541 319 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 CLINT1Q14677 625 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 IAH1Q2TAA2 248 aaPredicted RBP6.13□□□□□ -1.43
TPM3-201ENST00000271850 C4orf46Q504U0 113 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 PRR9Q5T870 116 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 MIC13Q5XKP0 118 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 OR10P1Q8NGE3 313 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 TNFRSF18Q9Y5U5 241 aa6.13□□□□□ -1.43
TPM3-201ENST00000271850 ZNF324O75467 553 aaPredicted RBP6.12□□□□□ -1.43
TPM3-201ENST00000271850 S100A7P31151 101 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 XGP55808 180 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 CD300CQ08708 224 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 DAZ2Q13117 558 aaKnown RBP6.12□□□□□ -1.43
TPM3-201ENST00000271850 ERCC8Q13216 396 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 PXDC1Q5TGL8 231 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 ZNF546Q86UE3 836 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 BPIFA4PQ86YQ2 179 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 OR10J6PQ8NGY7 276 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 LRRC20Q8TCA0 184 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 MITD1Q8WV92 249 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 ODF3Q96PU9 254 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 GSN-AS1Q9NRJ2 163 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms