RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 AKAP6Q13023 2319 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 ZNF524Q96C55 264 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 A8MWV9 139 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 C15orf65H3BRN8 121 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 RASL10AQ92737 203 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 LINC00158P58513 81 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 KIR3DS1Q14943 382 aa10.65□□□□□ -0.7
SMG9-201ENST00000270066 MRPL52Q86TS9 123 aaKnown RBP10.65□□□□□ -0.7
SMG9-201ENST00000270066 SPTBN2O15020 2390 aa10.65□□□□□ -0.71
SMG9-201ENST00000270066 OCIAD2Q56VL3 154 aa10.65□□□□□ -0.71
SMG9-201ENST00000270066 CDPF1Q6NVV7 123 aa10.65□□□□□ -0.71
SMG9-201ENST00000270066 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.71
SMG9-201ENST00000270066 CST9LQ9H4G1 147 aa10.65□□□□□ -0.71
SMG9-201ENST00000270066 MYO7BQ6PIF6 2116 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 SHISA9B4DS77 424 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 G3V318 75 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 ERCC8Q13216 396 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 TRAV8-1A0A0A6YYK1 113 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 CD300EQ496F6 205 aaPredicted RBP10.64□□□□□ -0.71
SMG9-201ENST00000270066 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 SYS1-DBNDD2H3BUS1 97 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 CSTL1Q9H114 145 aa10.64□□□□□ -0.71
SMG9-201ENST00000270066 TRAV8-4A0A0B4J246 113 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 GAGE2BQ13066 116 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 RSPO1Q2MKA7 263 aaPredicted RBP10.63□□□□□ -0.71
SMG9-201ENST00000270066 GAGE2EQ4V326 116 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 GAGE2DQ9UEU5 116 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 IGLV3-1P01715 115 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 ZFAND6Q6FIF0 208 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 C8orf31Q8N9H6 132 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 RHODO00212 210 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 PSCAO43653 123 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 ELANEP08246 267 aa10.63□□□□□ -0.71
SMG9-201ENST00000270066 WT1P19544 449 aaPredicted RBP10.63□□□□□ -0.71
SMG9-201ENST00000270066 H3BUA1 57 aa10.62□□□□□ -0.71
SMG9-201ENST00000270066 PAX2Q02962 417 aa10.62□□□□□ -0.71
SMG9-201ENST00000270066 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
SMG9-201ENST00000270066 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
SMG9-201ENST00000270066 HELZP42694 1942 aaKnown RBP10.62□□□□□ -0.71
SMG9-201ENST00000270066 PFN1P07737 140 aaKnown RBP10.62□□□□□ -0.71
SMG9-201ENST00000270066 PHF3Q92576 2039 aaKnown RBP10.62□□□□□ -0.71
SMG9-201ENST00000270066 TRPT1Q86TN4 253 aaKnown RBP10.62□□□□□ -0.71
SMG9-201ENST00000270066 E9PQ18 207 aa10.62□□□□□ -0.71
SMG9-201ENST00000270066 DEFB130BP0DP73 79 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 DEFB130AP0DP74 79 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 C10orf91Q5T1B1 145 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 CD5LO43866 347 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 RIF1Q5UIP0 2472 aaKnown RBP10.61□□□□□ -0.71
SMG9-201ENST00000270066 APOC4P55056 127 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 ADAMTSL5Q6ZMM2 481 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 VOPP1Q96AW1 172 aa10.61□□□□□ -0.71
SMG9-201ENST00000270066 KLF2Q9Y5W3 355 aaPredicted RBP10.61□□□□□ -0.71
SMG9-201ENST00000270066 SS18Q15532 418 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 RSPO3Q9BXY4 272 aaPredicted RBP10.6□□□□□ -0.71
SMG9-201ENST00000270066 TCTEX1D4Q5JR98 221 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 LIME1Q9H400 295 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 LRRK1Q38SD2 2015 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 DOCK8Q8NF50 2099 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 A0A087WWL8 130 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 HOXB4P17483 251 aaPredicted RBP10.6□□□□□ -0.71
SMG9-201ENST00000270066 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
SMG9-201ENST00000270066 MRPL27Q9P0M9 148 aaKnown RBP10.6□□□□□ -0.71
SMG9-201ENST00000270066 K7EM74 188 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 Q6ZWC4 215 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 TMEM14CQ9P0S9 112 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 XCL2Q9UBD3 114 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 CACNA1BQ00975 2339 aa10.6□□□□□ -0.71
SMG9-201ENST00000270066 COL6A6A6NMZ7 2263 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 FAM231BA6NCW3 169 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 H3BRN7 92 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 RNF138Q8WVD3 245 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 C1orf159Q96HA4 380 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 DAD1P61803 113 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
SMG9-201ENST00000270066 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.59□□□□□ -0.71
SMG9-201ENST00000270066 DEFB113Q30KQ7 82 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 M0R2P5 195 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 DKK1O94907 266 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 FER1L5A0AVI2 2057 aa10.59□□□□□ -0.71
SMG9-201ENST00000270066 SPINK8P0C7L1 97 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 PHLDA1Q8WV24 401 aaPredicted RBP10.58□□□□□ -0.72
SMG9-201ENST00000270066 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 SPINK13Q1W4C9 94 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 STPG4Q8N801 248 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 JPT2Q9H910 190 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 NOTCH4Q99466 2003 aa10.58□□□□□ -0.72
SMG9-201ENST00000270066 MMP23AO75900 390 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms