RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 TRAV6A0A075B6T7 132 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 TRAV5A0A0B4J249 113 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 C5orf51A6NDU8 294 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 FAM24AA6NFZ4 105 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 CCL18P55774 89 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 GFI1BQ5VTD9 330 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 MIC13Q5XKP0 118 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 RNF141Q8WVD5 230 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 SEC22CQ9BRL7 303 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 UQCC1Q9NVA1 299 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 WDR83OSQ9Y284 106 aa12.24□□□□□ -0.45
CSNK1D-201ENST00000269361 NBDYA0A0U1RRE5 68 aa12.23□□□□□ -0.45
CSNK1D-201ENST00000269361 GUK1Q16774 197 aa12.23□□□□□ -0.45
CSNK1D-201ENST00000269361 CCDC28AQ8IWP9 274 aa12.23□□□□□ -0.45
CSNK1D-201ENST00000269361 OR1L4Q8NGR5 311 aa12.23□□□□□ -0.45
CSNK1D-201ENST00000269361 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
CSNK1D-201ENST00000269361 NUDT15Q9NV35 164 aa12.23□□□□□ -0.45
CSNK1D-201ENST00000269361 CT45A10P0DMU9 189 aa12.22□□□□□ -0.45
CSNK1D-201ENST00000269361 PVALBP20472 110 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-201ENST00000269361 VWC2Q2TAL6 325 aa12.22□□□□□ -0.45
CSNK1D-201ENST00000269361 C12orf45Q8N5I9 185 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-201ENST00000269361 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
CSNK1D-201ENST00000269361 NPIPB6E9PJ23 425 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 LEPP41159 167 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 RPL29P47914 159 aaKnown RBP12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 SULT1A1P50225 295 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 OR5I1Q13606 314 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 CLINT1Q14677 625 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 ZNF575Q86XF7 245 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 ODF3Q96PU9 254 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 PFDN5Q99471 154 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 SLC39A9Q9NUM3 307 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.45
CSNK1D-201ENST00000269361 RYR1P21817 5038 aa12.2□□□□□ -0.46
CSNK1D-201ENST00000269361 J3KRW8 73 aa12.2□□□□□ -0.46
CSNK1D-201ENST00000269361 S100A11P31949 105 aa12.2□□□□□ -0.46
CSNK1D-201ENST00000269361 TNP2Q05952 138 aa12.2□□□□□ -0.46
CSNK1D-201ENST00000269361 C6orf223Q8N319 242 aa12.2□□□□□ -0.46
CSNK1D-201ENST00000269361 LYRM2Q9NU23 88 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-201ENST00000269361 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 TRAV12-3A0A0B4J271 114 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 UBE2L5PA0A1B0GUS4 154 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 GAGE12BA1L429 117 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 ZNF253O75346 499 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 GAGE7O76087 117 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 RLN2P04090 185 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 H2AFB2P0C5Z0 115 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 GAGE12FP0CL80 117 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 GAGE12GP0CL81 117 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 GAGE12IP0CL82 117 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 M6PRP20645 277 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 S100A10P60903 97 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 BAXQ07812 192 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 IL15RAQ13261 267 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 TMEM252Q8N6L7 170 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 CHAC2Q8WUX2 184 aa12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 GNPNAT1Q96EK6 184 aaPredicted RBP12.19□□□□□ -0.46
CSNK1D-201ENST00000269361 NACAE9PAV3 2078 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 TRBV19A0A075B6N1 114 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 HBG1P69891 147 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 HBG2P69892 147 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 RAB32Q13637 225 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 STX12Q86Y82 276 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 MRPL53Q96EL3 112 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 NDUFA13Q9P0J0 144 aa12.18□□□□□ -0.46
CSNK1D-201ENST00000269361 HOXA5P20719 270 aa12.17□□□□□ -0.46
CSNK1D-201ENST00000269361 ATP6V1FQ16864 119 aa12.17□□□□□ -0.46
CSNK1D-201ENST00000269361 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
CSNK1D-201ENST00000269361 PYGO2Q9BRQ0 406 aa12.17□□□□□ -0.46
CSNK1D-201ENST00000269361 CCDC32Q9BV29 185 aa12.17□□□□□ -0.46
CSNK1D-201ENST00000269361 TMEM14CQ9P0S9 112 aa12.17□□□□□ -0.46
CSNK1D-201ENST00000269361 A0A0J9YY99 117 aa12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 M0R3E3 92 aa12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 NDUFB4O95168 129 aa12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 SLC25A5P05141 298 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 FGF7P21781 194 aa12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 ERCC8Q13216 396 aa12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 Q9H8V8 135 aa12.16□□□□□ -0.46
CSNK1D-201ENST00000269361 FAM240BA0A1B0GVZ2 78 aa12.15□□□□□ -0.46
CSNK1D-201ENST00000269361 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-201ENST00000269361 GPN1Q9HCN4 374 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-201ENST00000269361 PRELID1Q9Y255 219 aa12.15□□□□□ -0.46
CSNK1D-201ENST00000269361 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.46
CSNK1D-201ENST00000269361 ABCA13Q86UQ4 5058 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 C7orf71A4D174 169 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 H3BNG1 76 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 MPDU1O75352 247 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 PDE6HQ13956 83 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 Q6ZTI0 123 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 LINC00477Q96M19 166 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 AGPAT4-IT1Q9H0P7 198 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 TMPRSS5Q9H3S3 457 aa12.14□□□□□ -0.47
CSNK1D-201ENST00000269361 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 KLLNB2CW77 178 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms