RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ZANQ9Y493 2812 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 F8P00451 2351 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 HIGD1CA8MV81 97 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 NDUFA4O00483 81 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 CRISP2P16562 243 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 CD33P20138 364 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 DEFB136Q30KP8 78 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 WDR73Q6P4I2 378 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 IMMP2LQ96T52 175 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 H3BUA1 57 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 WFDC12Q8WWY7 111 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 ZFP30Q9Y2G7 519 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 ZNF705DP0CH99 300 aaPredicted RBP7.22□□□□□ -1.25
SSR3-201ENST00000265044 ZNF705BP0CI00 300 aaPredicted RBP7.22□□□□□ -1.25
SSR3-201ENST00000265044 NTF3P20783 257 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 SNRPD3P62318 126 aaKnown RBP7.22□□□□□ -1.25
SSR3-201ENST00000265044 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
SSR3-201ENST00000265044 RPP21Q9H633 154 aaKnown RBP7.22□□□□□ -1.25
SSR3-201ENST00000265044 TRBV24-1A0A075B6N3 115 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 K7EN84 100 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 BUB3O43684 328 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 GPX1P07203 203 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 ELANEP08246 267 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 GZMBP10144 247 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 FABP4P15090 132 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 PSG3Q16557 428 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 EBLN2Q6P2I7 272 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 UNQ9165/PRO28630Q6UXU0 137 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 JMJD8Q96S16 334 aa7.21□□□□□ -1.25
SSR3-201ENST00000265044 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.25
SSR3-201ENST00000265044 TRBV9A0A0B4J1U6 114 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 ZNF253O75346 499 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 APOHP02749 345 aaPredicted RBP7.21□□□□□ -1.26
SSR3-201ENST00000265044 ZNF688P0C7X2 276 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 MEOX2P50222 304 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 ERCC8Q13216 396 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 PRR31Q5SQ13 230 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 ZNF48Q96MX3 618 aaPredicted RBP7.21□□□□□ -1.26
SSR3-201ENST00000265044 LY96Q9Y6Y9 160 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 GRIFINA4D1Z8 144 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 DIRC3C9JPN6 131 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 OR11H1Q8NG94 326 aa7.21□□□□□ -1.26
SSR3-201ENST00000265044 S100A8P05109 93 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
SSR3-201ENST00000265044 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 Q86TA4 180 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 NEU1Q99519 415 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 SMR3AQ99954 134 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 APCSP02743 223 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 NSUN5P1Q3KNT7 163 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 FOXC2Q99958 501 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 NRN1Q9NPD7 142 aa7.2□□□□□ -1.26
SSR3-201ENST00000265044 FOXL1Q12952 345 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 RIGQ13278 110 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 C1orf194Q5T5A4 169 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 OR10D4PQ8NGN7 298 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 C2CD3Q4AC94 2353 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 CSN3P07498 182 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 COX19Q49B96 90 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 PSMG4Q5JS54 123 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 FAM162BQ5T6X4 162 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 C9orf139Q6ZV77 190 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 TMEM183AQ8IXX5 376 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 PEMTQ9UBM1 199 aa7.19□□□□□ -1.26
SSR3-201ENST00000265044 FABP5P3A8MUU1 101 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 IGHG4P01861 327 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 IGLC2P0DOY2 106 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 PPIFP30405 207 aaKnown RBP7.18□□□□□ -1.26
SSR3-201ENST00000265044 TWIST1Q15672 202 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 C8orf49Q96NF6 230 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BKO60814 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HSBP1O75506 76 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HLA-DQA1P01909 254 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 PF4P02776 101 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 MT-ND6P03923 174 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BJP06899 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BOP23527 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HOXD3P31249 432 aaPredicted RBP7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BBP33778 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BDP58876 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BCP62807 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST2H2BEQ16778 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BHQ93079 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BNQ99877 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 HIST1H2BMQ99879 126 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 VGLL1Q99990 258 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 TMEM208Q9BTX3 173 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 SSBP4Q9BWG4 385 aaPredicted RBP7.18□□□□□ -1.26
SSR3-201ENST00000265044 GPR61Q9BZJ8 451 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 GCN1Q92616 2671 aaKnown RBP7.18□□□□□ -1.26
SSR3-201ENST00000265044 IGHV7-4-1A0A0J9YVY3 117 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
SSR3-201ENST00000265044 PMCHP20382 165 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 FOXE3Q13461 319 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 SPANXN1Q5VSR9 72 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 TSKUQ8WUA8 353 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms