RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 JMJD1CQ15652 2540 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 D6R8Y8 96 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 AMN1Q8IY45 258 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 KIR2DL5BA0A0G2JN68 375 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 KIR2DL5BA0A0G2JPC4 375 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 G3V318 75 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 CACNG7P62955 275 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 KIR2DL5AQ8N109 375 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 C11orf44Q8N8P7 122 aa15.79■□□□□ 0.12
CSPG5-201ENST00000264723 IGLC7A0M8Q6 106 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 TMEM213A2RRL7 107 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 DYNLRB2Q8TF09 96 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 C1orf159Q96HA4 380 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 NCOR1P1Q9H4R4 102 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 TP73-AS1Q9UF72 201 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 EBLN2Q6P2I7 272 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 GAGE10A6NGK3 116 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 SYS1-DBNDD2H3BUS1 97 aa15.78■□□□□ 0.12
CSPG5-201ENST00000264723 C8orf49Q96NF6 230 aa15.77■□□□□ 0.12
CSPG5-201ENST00000264723 TOMM40O96008 361 aa15.77■□□□□ 0.11
CSPG5-201ENST00000264723 Q86TA4 180 aa15.77■□□□□ 0.11
CSPG5-201ENST00000264723 ZNF414Q96IQ9 312 aa15.77■□□□□ 0.11
CSPG5-201ENST00000264723 RNF114Q9Y508 228 aa15.77■□□□□ 0.11
CSPG5-201ENST00000264723 PHLDA3Q9Y5J5 127 aa15.77■□□□□ 0.11
CSPG5-201ENST00000264723 HIVEP2P31629 2446 aa15.77■□□□□ 0.11
CSPG5-201ENST00000264723 IGHV3OR16-12A0A075B7B8 117 aa15.76■□□□□ 0.11
CSPG5-201ENST00000264723 NPFFO15130 113 aa15.76■□□□□ 0.11
CSPG5-201ENST00000264723 FER1L6-AS1Q8NA97 138 aa15.76■□□□□ 0.11
CSPG5-201ENST00000264723 M0R1W7 72 aa15.76■□□□□ 0.11
CSPG5-201ENST00000264723 ORMDL3Q8N138 153 aa15.76■□□□□ 0.11
CSPG5-201ENST00000264723 IFI27P40305 119 aaPredicted RBP15.75■□□□□ 0.11
CSPG5-201ENST00000264723 FAM74A4Q5TZK3 123 aa15.75■□□□□ 0.11
CSPG5-201ENST00000264723 MRPL27Q9P0M9 148 aaKnown RBP15.75■□□□□ 0.11
CSPG5-201ENST00000264723 WDFY3Q8IZQ1 3526 aa15.75■□□□□ 0.11
CSPG5-201ENST00000264723 ATP5L2Q7Z4Y8 100 aa15.75■□□□□ 0.11
CSPG5-201ENST00000264723 TMEM160Q9NX00 188 aa15.75■□□□□ 0.11
CSPG5-201ENST00000264723 KAAG1Q9UBP8 84 aa15.75■□□□□ 0.11
CSPG5-201ENST00000264723 NDUFB8O95169 186 aa15.74■□□□□ 0.11
CSPG5-201ENST00000264723 ID1P41134 155 aa15.74■□□□□ 0.11
CSPG5-201ENST00000264723 SP5Q6BEB4 398 aaPredicted RBP15.74■□□□□ 0.11
CSPG5-201ENST00000264723 TRAV8-6A0A0B4J262 113 aa15.74■□□□□ 0.11
CSPG5-201ENST00000264723 RAB9AP51151 201 aa15.74■□□□□ 0.11
CSPG5-201ENST00000264723 MAP1LC3AQ9H492 121 aa15.74■□□□□ 0.11
CSPG5-201ENST00000264723 FBLN7Q53RD9 439 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 AMMECR1LQ6DCA0 310 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 IGLC1P0CG04 106 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 TRAV41A0A0B4J266 112 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 ZNF562Q6V9R5 426 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 LINC00322Q6ZN03 302 aaPredicted RBP15.73■□□□□ 0.11
CSPG5-201ENST00000264723 IGF2BP2-AS1Q96M15 143 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 COL4A2P08572 1712 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 IGLV2-8P01709 118 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 CR1LQ2VPA4 569 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 LINC00311Q8N616 119 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 TMEM75Q8N9X5 138 aa15.73■□□□□ 0.11
CSPG5-201ENST00000264723 IGHV1-24A0A0C4DH33 117 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 ADORA2A-AS1P86434 159 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 MINOS1Q5TGZ0 78 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 FAM71F2Q6NXP2 309 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 ZC2HC1AQ96GY0 325 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 RNF5Q99942 180 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 SOX21Q9Y651 276 aaPredicted RBP15.72■□□□□ 0.11
CSPG5-201ENST00000264723 MINOS1-NBL1R4GNA1 71 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 ERCC8Q13216 396 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 HLA-DMBP28068 263 aa15.72■□□□□ 0.11
CSPG5-201ENST00000264723 ATP6V0E1O15342 81 aa15.71■□□□□ 0.11
CSPG5-201ENST00000264723 A6NDN8 102 aa15.71■□□□□ 0.11
CSPG5-201ENST00000264723 GDF5OSQ5U4N7 250 aa15.71■□□□□ 0.11
CSPG5-201ENST00000264723 MYOZ3Q8TDC0 251 aa15.71■□□□□ 0.11
CSPG5-201ENST00000264723 MTORP42345 2549 aa15.71■□□□□ 0.11
CSPG5-201ENST00000264723 LDLRAD2Q5SZI1 272 aa15.71■□□□□ 0.1
CSPG5-201ENST00000264723 FASNP49327 2511 aaKnown RBP15.71■□□□□ 0.1
CSPG5-201ENST00000264723 NACAE9PAV3 2078 aa15.71■□□□□ 0.1
CSPG5-201ENST00000264723 PAX8Q06710 450 aa15.7■□□□□ 0.1
CSPG5-201ENST00000264723 TMEM97Q5BJF2 176 aa15.7■□□□□ 0.1
CSPG5-201ENST00000264723 SH2D1AO60880 128 aa15.7■□□□□ 0.1
CSPG5-201ENST00000264723 RNF182Q8N6D2 247 aa15.7■□□□□ 0.1
CSPG5-201ENST00000264723 GTSF1Q8WW33 167 aa15.7■□□□□ 0.1
CSPG5-201ENST00000264723 FOXC2Q99958 501 aa15.7■□□□□ 0.1
CSPG5-201ENST00000264723 H3BUT2 72 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 PSG3Q16557 428 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 RASL11AQ6T310 242 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 CHCHD1Q96BP2 118 aaKnown RBP15.69■□□□□ 0.1
CSPG5-201ENST00000264723 IGKV1D-37A0A075B6S9 117 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 A0A1W2PRX2 142 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 FAM231DQ6ZW35 169 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 FABP5P3A8MUU1 101 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 SHANK2-AS3Q9BTD1 123 aa15.69■□□□□ 0.1
CSPG5-201ENST00000264723 TRBV19A0A075B6N1 114 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 A0A0G2JLM5 398 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 LEPP41159 167 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 MOB4Q9Y3A3 225 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 LCNL1Q6ZST4 164 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 THAP8Q8NA92 274 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 PRB1P04280 392 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 RPS20P60866 119 aaKnown RBP15.68■□□□□ 0.1
CSPG5-201ENST00000264723 FAM120AOSQ5T036 256 aa15.68■□□□□ 0.1
CSPG5-201ENST00000264723 IGLV2-23P01705 113 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 GTF2H5Q6ZYL4 71 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 IGKV1-17P01599 117 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms