RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 K7EQG2 157 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 TSPAN4O14817 238 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF688P0C7X2 276 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF705DP0CH99 300 aaPredicted RBP7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF705BP0CI00 300 aaPredicted RBP7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 PSG9Q00887 426 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 CYB561D1Q8N8Q1 229 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 WFDC9Q8NEX5 89 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 SLC50A1Q9BRV3 221 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 DERL1Q9BUN8 251 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 AAMDCQ9H7C9 122 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 EPDR1Q9UM22 224 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 IGKV2-40A0A087WW87 121 aaPredicted RBP7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 TRAV34A0A0B4J273 112 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 F6UB75 175 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF253O75346 499 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 IGKV2D-40P01614 121 aaPredicted RBP7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 RIPPLY3P57055 190 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF124Q15973 351 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 PSG3Q16557 428 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 NDUFA5Q16718 116 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 LCN12Q6JVE5 192 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 LYPD1Q8N2G4 141 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 EIF4E3Q8N5X7 224 aaKnown RBP7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 RPUSD4Q96CM3 377 aaKnown RBP7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF256Q9Y2P7 627 aaPredicted RBP7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 ARL2-SNX15V9GYD0 113 aa7.28□□□□□ -1.24
SNRNP40-201ENST00000263694 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 DIRC3C9JPN6 131 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 PEX7O00628 323 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 ISLRO14498 428 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 SFTA3P0C7M3 94 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 MEOX2P50222 304 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 PAFAH1B2P68402 229 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 ERCC8Q13216 396 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 ZNF674Q2M3X9 581 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 C9orf66Q5T8R8 295 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 GOLT1AQ6ZVE7 132 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 C5orf17Q8NAS9 161 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 CMTM2Q8TAZ6 248 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 SLC35B3Q9H1N7 401 aa7.27□□□□□ -1.25
SNRNP40-201ENST00000263694 PDE6DO43924 150 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 TCRAP04437 139 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 TAGLN2P37802 199 aaKnown RBP7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 ID1P41134 155 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 OXLD1Q5BKU9 147 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 GDF5OSQ5U4N7 250 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 UQCC3Q6UW78 93 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 ZNF738Q8NE65 137 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 VGLL1Q99990 258 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 TXNDC17Q9BRA2 123 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 NKX6-2Q9C056 277 aaPredicted RBP7.26□□□□□ -1.25
SNRNP40-201ENST00000263694 TRAV25A0A0B4J276 109 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 TMEM218A2RU14 115 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 PGPEP1LA6NFU8 196 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 F6UZH7 168 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 CD7P09564 240 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 ADCYAP1P18509 176 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 CSN1S1P47710 185 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 DEFB131AP59861 70 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 APRG1Q8IVJ8 170 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 C2CD4CQ8TF44 421 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 SPAG8Q99932 426 aaPredicted RBP7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 PARLQ9H300 379 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 OR4C46A6NHA9 309 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 KNCNA6PVL3 124 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 TMEM250H0YL14 139 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 IGLV2-11P01706 119 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 AKR1C3P42330 323 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 RPL35P42766 123 aaKnown RBP7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 ODF3L2Q3SX64 289 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 HIST1H2BAQ96A08 127 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 C11orf52Q96A22 123 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 ATG101Q9BSB4 218 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 WFDC10AQ9H1F0 79 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 SMDT1Q9H4I9 107 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 MAP6D1Q9H9H5 199 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 PRELID1Q9Y255 219 aa7.25□□□□□ -1.25
SNRNP40-201ENST00000263694 TRBV20OR9-2A0A075B6H5 130 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 F8W036 122 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 ATP6V1G1O75348 118 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 INSL3P51460 131 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 BEAN1Q3B7T3 259 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 SOHLH1Q5JUK2 328 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 PRNTQ86SH4 94 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 NHLRC2Q8NBF2 726 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 OR2K2Q8NGT1 345 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 Q8TAT8 98 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 SMIM7Q9BQ49 75 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 MCRIP2Q9BUT9 160 aaKnown RBP7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 AGPAT4-IT1Q9H0P7 198 aa7.24□□□□□ -1.25
SNRNP40-201ENST00000263694 ZNF727A8MUV8 499 aa7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 IGKV3-20P01619 116 aa7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 CNN1P51911 297 aaKnown RBP7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms