RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 THAP8Q8NA92 274 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 OR4A5Q8NH83 315 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 MBD3L4A6NDZ8 208 aaPredicted RBP10.23□□□□□ -0.77
SNX1-201ENST00000261889 MBD3L3A6NE82 208 aaPredicted RBP10.23□□□□□ -0.77
SNX1-201ENST00000261889 MBD3L5A6NJ08 208 aaPredicted RBP10.23□□□□□ -0.77
SNX1-201ENST00000261889 ZNF80P51504 273 aaPredicted RBP10.23□□□□□ -0.77
SNX1-201ENST00000261889 TMEM108Q6UXF1 575 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 MBD3L2Q8NHZ7 208 aaPredicted RBP10.23□□□□□ -0.77
SNX1-201ENST00000261889 RPEQ96AT9 228 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 A0A0G2JNJ9 132 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 TMEM8BA6NDV4 472 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 ORM1P02763 201 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 GRNP28799 593 aaKnown RBP10.22□□□□□ -0.77
SNX1-201ENST00000261889 FCER1GP30273 86 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 HIST1H1AQ02539 215 aaPredicted RBP10.22□□□□□ -0.77
SNX1-201ENST00000261889 CHCHD1Q96BP2 118 aaKnown RBP10.22□□□□□ -0.77
SNX1-201ENST00000261889 VGLL1Q99990 258 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 Q9UFV3 132 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 TIMM23O14925 209 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 GATA4P43694 442 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 GTSCR1Q86UQ5 136 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 OR10AG1Q8NH19 301 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 LINC01560Q8TB33 94 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 NGBQ9NPG2 151 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 POLQO75417 2590 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 IGHV1-3A0A0C4DH29 117 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 NCBP2LA6PVI3 153 aaKnown RBP10.22□□□□□ -0.77
SNX1-201ENST00000261889 TEX22C9J3V5 150 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 OVOL3O00110 214 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 COX8AP10176 69 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 CKS2P33552 79 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 C1orf185Q5T7R7 199 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 OR1N2Q8NGR9 330 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
SNX1-201ENST00000261889 THBDP07204 575 aa10.21□□□□□ -0.77
SNX1-201ENST00000261889 DEFB1P60022 68 aa10.21□□□□□ -0.77
SNX1-201ENST00000261889 RASL11AQ6T310 242 aa10.21□□□□□ -0.77
SNX1-201ENST00000261889 WFDC12Q8WWY7 111 aa10.21□□□□□ -0.77
SNX1-201ENST00000261889 CRXO43186 299 aaPredicted RBP10.21□□□□□ -0.78
SNX1-201ENST00000261889 GNG7O60262 68 aa10.21□□□□□ -0.78
SNX1-201ENST00000261889 LINC01545Q5VT33 79 aa10.21□□□□□ -0.78
SNX1-201ENST00000261889 ITPR1Q14643 2758 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 SH2D1AO60880 128 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 CT45A10P0DMU9 189 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 CSN1S1P47710 185 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 MRPL51Q4U2R6 128 aaKnown RBP10.2□□□□□ -0.78
SNX1-201ENST00000261889 PET117Q6UWS5 81 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 AMTNQ6UX39 209 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 USP9YO00507 2555 aaPredicted RBP10.2□□□□□ -0.78
SNX1-201ENST00000261889 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 A0A0G2JLM5 398 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 SIGLEC15Q6ZMC9 328 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 PRORYQ9H606 182 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 TMEM189A5PLL7 270 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 PRSS1P07477 247 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 EGR2P11161 476 aaPredicted RBP10.2□□□□□ -0.78
SNX1-201ENST00000261889 FXYD2P54710 66 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 ZNF414Q96IQ9 312 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 TRGV9Q99603 122 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 NDFIP1Q9BT67 221 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 OTORQ9NRC9 128 aa10.2□□□□□ -0.78
SNX1-201ENST00000261889 PEF1Q9UBV8 284 aaKnown RBP10.2□□□□□ -0.78
SNX1-201ENST00000261889 C16orf97H3BN30 126 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 TEX36Q5VZQ5 186 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 RNF125Q96EQ8 232 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 IGKV3-7A0A075B6H7 116 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 CD5LO43866 347 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 FGF6P10767 208 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 UCNP55089 124 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 RIGQ13278 110 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 STXBP6Q8NFX7 210 aa10.19□□□□□ -0.78
SNX1-201ENST00000261889 PRAC2D3DTV9 90 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 HAX1O00165 279 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 SPCS1Q9Y6A9 102 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 UTP20O75691 2785 aaKnown RBP10.18□□□□□ -0.78
SNX1-201ENST00000261889 K7EIM0 57 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 RNASE6Q93091 150 aaKnown RBP10.18□□□□□ -0.78
SNX1-201ENST00000261889 GTSF1LQ9H1H1 148 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 PIEZO1Q92508 2521 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 CRYGCP07315 174 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 Q6ZS92 163 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 ZNF491Q8N8L2 437 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 NHP2Q9NX24 153 aaKnown RBP10.18□□□□□ -0.78
SNX1-201ENST00000261889 LINC00527Q9UJ94 153 aa10.18□□□□□ -0.78
SNX1-201ENST00000261889 A1L4Q6 167 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 E7EQL1 145 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 I3L2K1 104 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 PSG3Q16557 428 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 TMEM155Q4W5P6 130 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 UFC1Q9Y3C8 167 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 TLN2Q9Y4G6 2542 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 NDPQ00604 133 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms