RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CD3EP07766 207 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 ZNF843Q8N446 348 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 RNF125Q96EQ8 232 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 ST20Q9HBF5 79 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.587e-7■■■□□ 18.1
SFSWAP-201ENST00000261674 TRBV19A0A075B6N1 114 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 NBPF19A0A087WUL8 3843 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 I3L2K1 104 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 NEU4Q8WWR8 484 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 JKAMPQ9P055 326 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 SOX21Q9Y651 276 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 SMKR1H3BMG3 65 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 LOXL1Q08397 574 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 CT83Q5H943 113 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 ITLN2Q8WWU7 325 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 A0A1W2PPR1 153 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 TNFRSF13BO14836 293 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 NCR2O95944 276 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 APOBEC3AP31941 199 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 UBTD1Q9HAC8 227 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 D6R8Y8 96 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 CSN1S1P47710 185 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 FOXE3Q13461 319 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 LDLRAD2Q5SZI1 272 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 Q8TAT8 98 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
SFSWAP-201ENST00000261674 TLN2Q9Y4G6 2542 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 CRIP1P50238 77 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 ZNF785A8K8V0 405 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 K7EIM0 57 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 HAX1O00165 279 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 ZNF491Q8N8L2 437 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 GFRA4Q9GZZ7 299 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 KAAG1Q9UBP8 84 aa11.4□□□□□ -0.58
SFSWAP-201ENST00000261674 IGHV3OR16-13A0A075B7E8 117 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 IGHV3-74A0A0B4J1X5 117 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 CRYGBP07316 175 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 RELQ04864 619 aaPredicted RBP11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 BVES-AS1Q5T3Y7 98 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 NAV2Q8IVL1 2488 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 NPIPB5A8MRT5 1133 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 SHANK2-AS3Q9BTD1 123 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 PLP1P60201 277 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 PSG3Q16557 428 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 PET117Q6UWS5 81 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 SIGLEC15Q6ZMC9 328 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 C8orf31Q8N9H6 132 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
SFSWAP-201ENST00000261674 LOC105371242A0A075B767 164 aa11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 TMEM11P17152 192 aa11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 HLA-DMBP28068 263 aa11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 C18orf15Q96N68 181 aa11.38□□□□□ -0.59
SFSWAP-201ENST00000261674 TWIST1Q15672 202 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 C12orf54Q6X4T0 127 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 B9A039 149 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 TAX1BP3O14907 124 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 IGHV3-66A0A0C4DH42 116 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 CRXO43186 299 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 ORM1P02763 201 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 GPR183P32249 361 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 ZNF414Q96IQ9 312 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 ZNF747Q9BV97 191 aa11.37□□□□□ -0.59
SFSWAP-201ENST00000261674 FLNBO75369 2602 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 FBN2P35556 2912 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 FAM231BA6NCW3 169 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 NBR2O15453 112 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 CACNG7P62955 275 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 VPS25Q9BRG1 176 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 IGHV2-70DA0A0C4DH43 119 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 CKS2P33552 79 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 DPM3Q9P2X0 92 aa11.36□□□□□ -0.59
SFSWAP-201ENST00000261674 H3BRN7 92 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 TNFRSF14Q92956 283 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 RAB37Q96AX2 223 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 IGHV3-49A0A0A0MS15 119 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 NMUP48645 174 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 TM4SF20Q53R12 229 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 SIGLEC8Q9NYZ4 499 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 SH2D1AO60880 128 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 AP1S3Q96PC3 154 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms