RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TRGV11A0A075B6L2 103 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 AGFG2O95081 481 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 LY6G5BQ8NDX9 201 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PRADC1Q9BSG0 188 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 E9PLD3 99 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 DYNLRB2Q8TF09 96 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 IGHV1-69DA0A0B4J2H0 117 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 PCOLCEQ15113 449 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 GUSBP11Q6P575 273 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 LINC00477Q96M19 166 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 SHANK2-AS3Q9BTD1 123 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 TRBV6-1A0A0K0K1D8 114 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 C2orf70A6NJV1 201 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 GLRXP35754 106 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 AMTNQ6UX39 209 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 IGHV5-10-1A0A0J9YXX1 117 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 CD3EP07766 207 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 COLCA1Q6ZS62 124 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 Q6ZSR3 168 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 Q6ZT83 130 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 WIPF3A6NGB9 483 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 LMO1P25800 156 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 ECSCRQ19T08 205 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 SPINK14Q6IE38 97 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 PRSS57Q6UWY2 283 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 LYPD6Q86Y78 171 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 THAP8Q8NA92 274 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 DDB2Q92466 427 aa6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 MRPL35Q9NZE8 188 aaKnown RBP6.75□□□□□ -1.33
SNCAIP-201ENST00000261367 C1orf122Q6ZSJ8 110 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 LINC00643Q86TS7 51 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 FAM186AA6NE01 2351 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 TMEM219Q86XT9 240 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 PHLDA1Q8WV24 401 aaPredicted RBP6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 IGF2BP2-AS1Q96M15 143 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 HS3ST6Q96QI5 342 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 MCRIP2Q9BUT9 160 aaKnown RBP6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 TM2D2Q9BX73 214 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 SELENOKQ9Y6D0 94 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 MPDZO75970 2070 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 H3BQ85 93 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 TMEM92Q6UXU6 159 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 TDRD6O60522 2096 aaKnown RBP6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 K7EM74 188 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 IGKV1-39P01597 117 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 IGKV1D-39P04432 117 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 COX6A1P12074 109 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 V9GYY9 64 aa6.74□□□□□ -1.33
SNCAIP-201ENST00000261367 RP1P56715 2156 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 IGKV1-6A0A0C4DH72 117 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 C5orf67F2Z3F1 127 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 DUSP14O95147 198 aaKnown RBP6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 CFHR2P36980 270 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 LCNL1Q6ZST4 164 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 WFDC12Q8WWY7 111 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 ABCA4P78363 2273 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 FAM236AA0A1B0GUQ0 79 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 FAM236BA0A1B0GV22 79 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 APELAP0DMC3 54 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 TMEM240Q5SV17 173 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 C16orf54Q6UWD8 224 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 CLUHP3Q96NS8 147 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 PEMTQ9UBM1 199 aa6.73□□□□□ -1.33
SNCAIP-201ENST00000261367 TRAV13-2A0A0B4J235 113 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 LINC00473A8K010 186 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 FXYD2P54710 66 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 PLA2G2FQ9BZM2 168 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 NTN3O00634 580 aaPredicted RBP6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 CLPSP04118 112 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 PSG7Q13046 419 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 LEAP2Q969E1 77 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 SMIM2Q9BVW6 85 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 TNRC18O15417 2968 aaPredicted RBP6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 SLC22A18ASQ8N1D0 253 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 PMS2P5A8MQ11 134 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 LINC01619G3V211 115 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 SSC4DQ8WTU2 575 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 IGFBPL1Q8WX77 278 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 DPM3Q9P2X0 92 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
SNCAIP-201ENST00000261367 SRRM5B3KS81 715 aa6.71□□□□□ -1.33
SNCAIP-201ENST00000261367 NBR2O15453 112 aa6.71□□□□□ -1.33
SNCAIP-201ENST00000261367 ZFHX4Q86UP3 3567 aa6.71□□□□□ -1.33
SNCAIP-201ENST00000261367 TRBV19A0A075B6N1 114 aa6.71□□□□□ -1.33
SNCAIP-201ENST00000261367 CGB1A6NKQ9 187 aa6.71□□□□□ -1.33
SNCAIP-201ENST00000261367 C16orf97H3BN30 126 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms