RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 COQ4Q9Y3A0 265 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 SERP1Q9Y6X1 66 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 NKTRP30414 1462 aaKnown RBP2.58□□□□□ -2
CCDC54-201ENST00000261058 COL4A4P53420 1690 aaPredicted RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 RALGAPA2Q2PPJ7 1873 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 TICRRQ7Z2Z1 1910 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 CEP170Q5SW79 1584 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 CRB1P82279 1406 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 PIK3C2BO00750 1634 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 MADDQ8WXG6 1647 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 IGLV4-60A0A075B6I1 120 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 IGKV2-28A0A075B6P5 120 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 TRAV9-1A0A075B6T8 112 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 IGKV6-21A0A0C4DH24 114 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 MUC21A0A0G2JKD1 596 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 A0A1B0GW54 56 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SNRPGP15A8MWD9 76 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 C4orf51C9J302 202 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 IGKV2D-28P01615 120 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 RBP4P02753 201 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 TPT1P13693 172 aaKnown RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 HLA-DRB4P13762 266 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 LGALS3P17931 250 aaKnown RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 HLA-DMBP28068 263 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 MRPS36P82909 103 aaKnown RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SP6Q3SY56 376 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 LINC00483Q53H64 154 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 PYDC2Q56P42 97 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SPRNQ5BIV9 151 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 EBLN2Q6P2I7 272 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 ZNF322Q6U7Q0 402 aaPredicted RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 UNQ9165/PRO28630Q6UXU0 137 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SMIM5Q71RC9 77 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 TEN1Q86WV5 123 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 APCDD1LQ8NCL9 501 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 MRPL30Q8TCC3 161 aaKnown RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 ZNF721Q8TF20 911 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 ZC2HC1AQ96GY0 325 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 PRELID3AQ96N28 172 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 C11orf68Q9H3H3 251 aaKnown RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 BCL2L10Q9HD36 194 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 CYTL1Q9NRR1 136 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SLC39A9Q9NUM3 307 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 HLA-DRB4X5D2U9 266 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 PXDNLA1KZ92 1463 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 NUP210Q8TEM1 1887 aaPredicted RBP2.57□□□□□ -2
CCDC54-201ENST00000261058 ABCC6O95255 1503 aa2.57□□□□□ -2
CCDC54-201ENST00000261058 SCN11AQ9UI33 1791 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 TIAM1Q13009 1591 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 SAMD9Q5K651 1589 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 FANCMQ8IYD8 2048 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 PARP14Q460N5 1801 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 KIF13AQ9H1H9 1805 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 ADAMTS13Q76LX8 1427 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 QRICH2Q9H0J4 1663 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 TRBV20OR9-2A0A075B6H5 130 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 DPRXA6NFQ7 191 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 H3BT86 120 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 LST1O00453 97 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 SSSCA1O60232 199 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 SLC25A14O95258 325 aaPredicted RBP2.56□□□□□ -2
CCDC54-201ENST00000261058 TCRAP04437 139 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 COX7CP15954 63 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 LSM3P62310 102 aaKnown RBP2.56□□□□□ -2
CCDC54-201ENST00000261058 SYCNQ0VAF6 134 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 CDK5R1Q15078 307 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 MPV17L2Q567V2 206 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 MARCH3Q86UD3 253 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 BPIFA4PQ86YQ2 179 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 DEFB107AQ8IZN7 70 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 C18orf32Q8TCD1 76 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 PPDPFLQ8WWR9 84 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 TOMM6Q96B49 74 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 C20orf78Q9BR46 151 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 SHANK2-AS3Q9BTD1 123 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 SLC35B3Q9H1N7 401 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 ZNF706Q9Y5V0 76 aaPredicted RBP2.56□□□□□ -2
CCDC54-201ENST00000261058 CFAP74Q9C0B2 1584 aa2.56□□□□□ -2
CCDC54-201ENST00000261058 TNRC6AQ8NDV7 1962 aaKnown RBP2.55□□□□□ -2
CCDC54-201ENST00000261058 ADGRL1O94910 1474 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 DSCAML1Q8TD84 2053 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 GPATCH8Q9UKJ3 1502 aaKnown RBP2.55□□□□□ -2
CCDC54-201ENST00000261058 ATAD5Q96QE3 1844 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 IGHV3OR15-7A0A075B7D8 119 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 TRGV5A0A0B4J1U4 118 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 A8MUN3 132 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 UMAD1C9J7I0 102 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 C17orf112F2Z3M2 114 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 GNGT2O14610 69 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 SYNGR2O43760 224 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 CD3DP04234 171 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 IL5P05113 134 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 GYPBP06028 91 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 CXCL1P09341 107 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 ZNF688P0C7X2 276 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 ZNF286BP0CG31 522 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 FGF12P61328 243 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms