RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 NACAE9PAV3 2078 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 H7BYZ3 331 aa11.82□□□□□ -0.52
CGREF1-201ENST00000260595 RAB31Q13636 194 aa11.82□□□□□ -0.52
CGREF1-201ENST00000260595 GFI1BQ5VTD9 330 aa11.82□□□□□ -0.52
CGREF1-201ENST00000260595 Q6ZRG5 221 aa11.82□□□□□ -0.52
CGREF1-201ENST00000260595 TMEM263Q8WUH6 116 aaKnown RBP11.82□□□□□ -0.52
CGREF1-201ENST00000260595 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
CGREF1-201ENST00000260595 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
CGREF1-201ENST00000260595 IGSF23A1L1A6 192 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 H2AFB2P0C5Z0 115 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 RPL29P47914 159 aaKnown RBP11.81□□□□□ -0.52
CGREF1-201ENST00000260595 SULT1A1P50225 295 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 GUK1Q16774 197 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 C1orf134Q5TEV5 83 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 TMEM252Q8N6L7 170 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 LINC00612Q8N6U2 182 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 OR10J6PQ8NGY7 276 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 ZNRF2Q8NHG8 242 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 CCDC32Q9BV29 185 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
CGREF1-201ENST00000260595 NUDT3O95989 172 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 CT45A10P0DMU9 189 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 PVALBP20472 110 aaPredicted RBP11.8□□□□□ -0.52
CGREF1-201ENST00000260595 S100A11P31949 105 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 RAB32Q13637 225 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 SOHLH1Q5JUK2 328 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 RNF141Q8WVD5 230 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 SLC39A9Q9NUM3 307 aa11.8□□□□□ -0.52
CGREF1-201ENST00000260595 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
CGREF1-201ENST00000260595 ZNF253O75346 499 aa11.79□□□□□ -0.52
CGREF1-201ENST00000260595 S100A10P60903 97 aa11.79□□□□□ -0.52
CGREF1-201ENST00000260595 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
CGREF1-201ENST00000260595 PFDN5Q99471 154 aa11.79□□□□□ -0.52
CGREF1-201ENST00000260595 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
CGREF1-201ENST00000260595 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
CGREF1-201ENST00000260595 RYR1P21817 5038 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 TRBV19A0A075B6N1 114 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 NBDYA0A0U1RRE5 68 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 FAM240BA0A1B0GVZ2 78 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 NDUFB4O95168 129 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 BAXQ07812 192 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 ATP6V1FQ16864 119 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 CCDC28AQ8IWP9 274 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 MRPL53Q96EL3 112 aaKnown RBP11.77□□□□□ -0.53
CGREF1-201ENST00000260595 TMEM14CQ9P0S9 112 aa11.77□□□□□ -0.53
CGREF1-201ENST00000260595 TRAV12-3A0A0B4J271 114 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 J3KRW8 73 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 M0R3E3 92 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 FGF7P21781 194 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 LEPP41159 167 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 CCL18P55774 89 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 HBG1P69891 147 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 HBG2P69892 147 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 STX12Q86Y82 276 aa11.76□□□□□ -0.53
CGREF1-201ENST00000260595 HIST1H1EP10412 219 aaKnown RBP11.75□□□□□ -0.53
CGREF1-201ENST00000260595 HOXA5P20719 270 aa11.75□□□□□ -0.53
CGREF1-201ENST00000260595 ERCC8Q13216 396 aa11.75□□□□□ -0.53
CGREF1-201ENST00000260595 ASAH1Q13510 395 aa11.75□□□□□ -0.53
CGREF1-201ENST00000260595 GCSAMLQ5JQS6 135 aa11.75□□□□□ -0.53
CGREF1-201ENST00000260595 ZNF575Q86XF7 245 aa11.75□□□□□ -0.53
CGREF1-201ENST00000260595 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
CGREF1-201ENST00000260595 GAGE12BA1L429 117 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 MPDU1O75352 247 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 GAGE7O76087 117 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 PYYP10082 97 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 NHLH2Q02577 135 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 TNP2Q05952 138 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 OR5I1Q13606 314 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 MZT2BQ6NZ67 158 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 PYGO2Q9BRQ0 406 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 NPCDR1Q9BY65 106 aa11.74□□□□□ -0.53
CGREF1-201ENST00000260595 GPN1Q9HCN4 374 aaPredicted RBP11.74□□□□□ -0.53
CGREF1-201ENST00000260595 TRAV26-1A0A087WT03 109 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 KLLNB2CW77 178 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
CGREF1-201ENST00000260595 RLN2P04090 185 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 M6PRP20645 277 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
CGREF1-201ENST00000260595 PDE6HQ13956 83 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 SSX7Q7RTT5 188 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
CGREF1-201ENST00000260595 ZNF503Q96F45 646 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 AGPAT4-IT1Q9H0P7 198 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 PRELID1Q9Y255 219 aa11.73□□□□□ -0.53
CGREF1-201ENST00000260595 SIX6O95475 246 aa11.72□□□□□ -0.53
CGREF1-201ENST00000260595 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
CGREF1-201ENST00000260595 CLINT1Q14677 625 aa11.72□□□□□ -0.53
CGREF1-201ENST00000260595 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms