RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
CCDC90B-201ENST00000260054 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 SAMD13Q5VXD3 122 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 Q9H3A6 140 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 F8W036 122 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 ADCYAP1P18509 176 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 ID1P41134 155 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 PSG9Q00887 426 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
CCDC90B-201ENST00000260054 PRB4P10163 310 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-201ENST00000260054 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-201ENST00000260054 ICAM4Q14773 271 aa11.77□□□□□ -0.53
CCDC90B-201ENST00000260054 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
CCDC90B-201ENST00000260054 LYPD1Q8N2G4 141 aa11.77□□□□□ -0.53
CCDC90B-201ENST00000260054 NOTCH1P46531 2555 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 A0A1W2PRE2 83 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 M0R3E3 92 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 PAGE4O60829 102 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 DEFB131AP59861 70 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 DEFB1P60022 68 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 CD81P60033 236 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 PSG3Q16557 428 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 PRR25Q96S07 402 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 AAMDCQ9H7C9 122 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 C19orf73Q9NVV2 129 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
CCDC90B-201ENST00000260054 PGPA6NDG6 321 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 ZNF705FA8MVS1 300 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 PPT1P50897 306 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 ZNF124Q15973 351 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 WFDC10AQ9H1F0 79 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 PCP4L1A6NKN8 68 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 SUMO1P63165 101 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 GTSCR1Q86UQ5 136 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 MANBALQ9NQG1 85 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 ARL2-SNX15V9GYD0 113 aa11.75□□□□□ -0.53
CCDC90B-201ENST00000260054 OR11H12B2RN74 326 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 ATP5G3P48201 142 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 HAGHQ16775 308 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 CST9LP1Q5W188 147 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 Q8N1Y9 231 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 FAM110AQ9BQ89 295 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 TREM1Q9NP99 234 aa11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 ZMAT5Q9UDW3 170 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-201ENST00000260054 PRAC2D3DTV9 90 aa11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 F6UB75 175 aa11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 BCL2P10415 239 aa11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 TMEM88Q6PEY1 159 aa11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 RPUSD4Q96CM3 377 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 MRPL53Q96EL3 112 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 C12orf57Q99622 126 aa11.73□□□□□ -0.53
CCDC90B-201ENST00000260054 IFNA1P01562 189 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 AKR1D1P51857 326 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 CMC4P56277 68 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 GNG5P63218 68 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 GDF5OSQ5U4N7 250 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 CBLN2Q8IUK8 224 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 RARRES2Q99969 163 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 DNAH3Q8TD57 4116 aa11.72□□□□□ -0.53
CCDC90B-201ENST00000260054 C11orf94C9JXX5 98 aa11.71□□□□□ -0.53
CCDC90B-201ENST00000260054 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
CCDC90B-201ENST00000260054 CMTM2Q8TAZ6 248 aa11.71□□□□□ -0.53
CCDC90B-201ENST00000260054 LOC102723971A0A1B0GUV8 181 aa11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 RBFOX3A6NFN3 312 aa11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 KNCNA6PVL3 124 aa11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 DEFB125Q8N687 156 aa11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 RPH3ALQ9UNE2 315 aa11.71□□□□□ -0.54
CCDC90B-201ENST00000260054 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-201ENST00000260054 CSN1S1P47710 185 aa11.7□□□□□ -0.54
CCDC90B-201ENST00000260054 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-201ENST00000260054 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
CCDC90B-201ENST00000260054 VAX2Q9UIW0 290 aa11.7□□□□□ -0.54
CCDC90B-201ENST00000260054 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
CCDC90B-201ENST00000260054 IGKV2-40A0A087WW87 121 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 A0A0J9YX75 114 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 DIRC3C9JPN6 131 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 IGKV2D-40P01614 121 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 TCRAP04437 139 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 RAB5BP61020 215 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 MEF2BQ02080 365 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 PEA15Q15121 130 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 ACTL10Q5JWF8 245 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 C15orf54Q8N8G6 183 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
CCDC90B-201ENST00000260054 AGRNO00468 2067 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms