RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ZNF785A8K8V0 405 aa21.26■□□□□ 0.99
CCM2-201ENST00000258781 TRBV12-3P01733 135 aa21.26■□□□□ 0.99
CCM2-201ENST00000258781 MEOX2P50222 304 aa21.25■□□□□ 0.99
CCM2-201ENST00000258781 FAM209BQ5JX69 171 aa21.25■□□□□ 0.99
CCM2-201ENST00000258781 FBLL1A6NHQ2 334 aaKnown RBP21.24■□□□□ 0.99
CCM2-201ENST00000258781 IGHV3-11P01762 117 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 PSMB8P28062 276 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 COX19Q49B96 90 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 CT83Q5H943 113 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 DUX5Q96PT3 197 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 IZUMO1RA6ND01 250 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 APOHP02749 345 aaPredicted RBP21.24■□□□□ 0.99
CCM2-201ENST00000258781 TCL1AP56279 114 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 TSKUQ8WUA8 353 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 SLC50A1Q9BRV3 221 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 NPFFR1Q9GZQ6 430 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 RPP21Q9H633 154 aaKnown RBP21.24■□□□□ 0.99
CCM2-201ENST00000258781 TMEM160Q9NX00 188 aa21.24■□□□□ 0.99
CCM2-201ENST00000258781 ZNF207O43670 478 aaKnown RBP21.23■□□□□ 0.99
CCM2-201ENST00000258781 CA1P00915 261 aaPredicted RBP21.23■□□□□ 0.99
CCM2-201ENST00000258781 CDX1P47902 265 aaPredicted RBP21.23■□□□□ 0.99
CCM2-201ENST00000258781 LINC00322Q6ZN03 302 aaPredicted RBP21.23■□□□□ 0.99
CCM2-201ENST00000258781 NSD1Q96L73 2696 aaPredicted RBP21.23■□□□□ 0.99
CCM2-201ENST00000258781 P01737 135 aa21.22■□□□□ 0.99
CCM2-201ENST00000258781 DAZAP1Q96EP5 407 aaKnown RBP21.22■□□□□ 0.99
CCM2-201ENST00000258781 IGHV3-66A0A0C4DH42 116 aa21.22■□□□□ 0.99
CCM2-201ENST00000258781 C16orf54Q6UWD8 224 aa21.22■□□□□ 0.99
CCM2-201ENST00000258781 LCNL1Q6ZST4 164 aa21.22■□□□□ 0.99
CCM2-201ENST00000258781 CYSRT1A8MQ03 144 aa21.21■□□□□ 0.99
CCM2-201ENST00000258781 S100A8P05109 93 aa21.21■□□□□ 0.99
CCM2-201ENST00000258781 Q71RC1 249 aaPredicted RBP21.21■□□□□ 0.99
CCM2-201ENST00000258781 GBGT1Q8N5D6 347 aa21.21■□□□□ 0.99
CCM2-201ENST00000258781 GNB1LQ9BYB4 327 aa21.21■□□□□ 0.99
CCM2-201ENST00000258781 ZNF702PQ9H963 129 aa21.21■□□□□ 0.99
CCM2-201ENST00000258781 NAT8BQ9UHF3 227 aa21.21■□□□□ 0.99
CCM2-201ENST00000258781 NPIPB6E9PJ23 425 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 CHEK1O14757 476 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 WDR73Q6P4I2 378 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 OR4B1Q8NGF8 309 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 NF1P21359 2839 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 CBLN1P23435 193 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 COA6Q5JTJ3 125 aaKnown RBP21.2■□□□□ 0.98
CCM2-201ENST00000258781 UNQ9165/PRO28630Q6UXU0 137 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 GLMPQ8WWB7 406 aa21.2■□□□□ 0.98
CCM2-201ENST00000258781 IGHV3OR16-13A0A075B7E8 117 aa21.19■□□□□ 0.98
CCM2-201ENST00000258781 IGHV3-74A0A0B4J1X5 117 aa21.19■□□□□ 0.98
CCM2-201ENST00000258781 A8MWL6 223 aa21.19■□□□□ 0.98
CCM2-201ENST00000258781 MT-ND6P03923 174 aa21.19■□□□□ 0.98
CCM2-201ENST00000258781 LINC00518Q8N0U6 118 aa21.19■□□□□ 0.98
CCM2-201ENST00000258781 ZC2HC1AQ96GY0 325 aa21.19■□□□□ 0.98
CCM2-201ENST00000258781 IGHV3-49A0A0A0MS15 119 aa21.18■□□□□ 0.98
CCM2-201ENST00000258781 PEF1Q9UBV8 284 aaKnown RBP21.18■□□□□ 0.98
CCM2-201ENST00000258781 RASL11AQ6T310 242 aa21.18■□□□□ 0.98
CCM2-201ENST00000258781 MRPL18Q9H0U6 180 aaKnown RBP21.18■□□□□ 0.98
CCM2-201ENST00000258781 IGKV2-40A0A087WW87 121 aaPredicted RBP21.17■□□□□ 0.98
CCM2-201ENST00000258781 IGKV2D-40P01614 121 aaPredicted RBP21.17■□□□□ 0.98
CCM2-201ENST00000258781 SLC35B1P78383 322 aa21.17■□□□□ 0.98
CCM2-201ENST00000258781 LCN12Q6JVE5 192 aa21.17■□□□□ 0.98
CCM2-201ENST00000258781 HIST3H2BBQ8N257 126 aa21.17■□□□□ 0.98
CCM2-201ENST00000258781 NUP35Q8NFH5 326 aa21.17■□□□□ 0.98
CCM2-201ENST00000258781 NEU1Q99519 415 aa21.17■□□□□ 0.98
CCM2-201ENST00000258781 XKRY2A2RUG3 117 aa21.16■□□□□ 0.98
CCM2-201ENST00000258781 SNURFLB1AK76 121 aa21.16■□□□□ 0.98
CCM2-201ENST00000258781 HLA-DMBP28068 263 aa21.16■□□□□ 0.98
CCM2-201ENST00000258781 COX8CQ7Z4L0 72 aa21.16■□□□□ 0.98
CCM2-201ENST00000258781 MRPL53Q96EL3 112 aaKnown RBP21.16■□□□□ 0.98
CCM2-201ENST00000258781 GFRA4Q9GZZ7 299 aa21.16■□□□□ 0.98
CCM2-201ENST00000258781 F8P00451 2351 aa21.16■□□□□ 0.98
CCM2-201ENST00000258781 SPINK4O60575 86 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 FOSL1P15407 271 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 FOXE3Q13461 319 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 SAPCD1Q5SSQ6 148 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 IGFL4Q6B9Z1 124 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 TMEM86BQ8N661 226 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 WIPF2Q8TF74 440 aaPredicted RBP21.15■□□□□ 0.98
CCM2-201ENST00000258781 ESM1Q9NQ30 184 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 A0A1W2PS18 150 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 FAM231BA6NCW3 169 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 HIGD1CA8MV81 97 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 FRMD6-AS1P0C7T7 363 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 MRPL54Q6P161 138 aaKnown RBP21.15■□□□□ 0.98
CCM2-201ENST00000258781 TMEM136Q6ZRR5 245 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 CLEC5AQ9NY25 188 aa21.15■□□□□ 0.98
CCM2-201ENST00000258781 DNAJC9-AS1A6NH13 148 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 IFITM10A6NMD0 228 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 ELANEP08246 267 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 SRD5A1P18405 259 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 GFI1BQ5VTD9 330 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 C8orf86Q6ZUL3 223 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 Q8N2B8 174 aa21.14■□□□□ 0.97
CCM2-201ENST00000258781 RBAKDNA6NC62 111 aa21.13■□□□□ 0.97
CCM2-201ENST00000258781 CT45A10P0DMU9 189 aa21.13■□□□□ 0.97
CCM2-201ENST00000258781 C10orf99Q6UWK7 81 aa21.13■□□□□ 0.97
CCM2-201ENST00000258781 ATP5L2Q7Z4Y8 100 aa21.13■□□□□ 0.97
CCM2-201ENST00000258781 FN1P02751 2386 aaKnown RBP21.13■□□□□ 0.97
CCM2-201ENST00000258781 TRAV8-2A0A0B4J237 113 aa21.12■□□□□ 0.97
CCM2-201ENST00000258781 ZNF705FA8MVS1 300 aaPredicted RBP21.12■□□□□ 0.97
CCM2-201ENST00000258781 HLA-DQA1P01909 254 aa21.12■□□□□ 0.97
CCM2-201ENST00000258781 PRB4P10163 310 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms