RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IER5LQ5T953 404 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 HEATR5BQ9P2D3 2071 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 C17orf51A8MQB3 221 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 H3BTX0 84 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 CCL16O15467 120 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 FOXS1O43638 330 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 CCL1P22362 96 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 MDP1Q86V88 176 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 PSENENQ9NZ42 101 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 TRIOBPQ9H2D6 2365 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 MYOFQ9NZM1 2061 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 BGLAPP02818 100 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 GP9P14770 177 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 PCBD1P61457 104 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 RPL18Q07020 188 aaKnown RBP6.05□□□□□ -1.44
GPNMB-201ENST00000258733 FHL1Q13642 323 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 ORMDL2Q53FV1 153 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 TMEM170BQ5T4T1 132 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 SERTAD4-AS1Q5TG53 156 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 MARCH3Q86UD3 253 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 OVCA2Q8WZ82 227 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF837Q96EG3 531 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-201ENST00000258733 LINC01600Q96MT4 127 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 SHANK1Q9Y566 2161 aa6.05□□□□□ -1.44
GPNMB-201ENST00000258733 A0A1B0GXF2 115 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 PEX7O00628 323 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 CA6P23280 308 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 CDAP32320 146 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 RPS27P42677 84 aaKnown RBP6.04□□□□□ -1.44
GPNMB-201ENST00000258733 SNRPD3P62318 126 aaKnown RBP6.04□□□□□ -1.44
GPNMB-201ENST00000258733 LINC00305Q7Z4B0 112 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 C5orf38Q86SI9 138 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 LY6G5BQ8NDX9 201 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 TMEM52Q8NDY8 209 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 RITA1Q96K30 269 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 IGLV3-10A0A075B6K4 115 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 TRGV5A0A0B4J1U4 118 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 LINC01619G3V211 115 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 CD24P25063 80 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 FHL5Q5TD97 284 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF793Q6ZN11 406 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 RPRMLQ8N4K4 120 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 FAM168AQ92567 244 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 Q9Y3F1 56 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF22P17026 224 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-201ENST00000258733 SAA4P35542 130 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 CRIP2P52943 208 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-201ENST00000258733 HBBP68871 147 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 ERCC8Q13216 396 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 LINC00643Q86TS7 51 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 EEF1AKMT3Q96AZ1 226 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 SPACA5Q96QH8 159 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 SLC25A2Q9BXI2 301 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 PROK2Q9HC23 129 aa6.04□□□□□ -1.44
GPNMB-201ENST00000258733 IAPPP10997 89 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 UBE2D1P51668 147 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 C9orf139Q6ZV77 190 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 FGF22Q9HCT0 170 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 RAI1Q7Z5J4 1906 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-201ENST00000258733 A0A0C4DFX4 3053 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 ARL14EPLP0DKL9 152 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 DKK2Q9UBU2 259 aa6.03□□□□□ -1.44
GPNMB-201ENST00000258733 IGKV1D-16P01601 117 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 SYNJ2BPP57105 145 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 NPCDR1Q9BY65 106 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 ZNF355PQ9NSJ1 428 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 LAMTOR3Q9UHA4 124 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 HIGD1CA8MV81 97 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 BUB3O43684 328 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 SS18L1O75177 396 aaPredicted RBP6.02□□□□□ -1.45
GPNMB-201ENST00000258733 HMGN2P05204 90 aaKnown RBP6.02□□□□□ -1.45
GPNMB-201ENST00000258733 RPL18AQ02543 176 aaKnown RBP6.02□□□□□ -1.45
GPNMB-201ENST00000258733 FHL2Q14192 279 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 MIC13Q5XKP0 118 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 Q6ZVL8 140 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 SSMEM1Q8WWF3 244 aa6.02□□□□□ -1.45
GPNMB-201ENST00000258733 A0A096LNJ9 63 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 ACYP1P07311 99 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 SPANXN5Q5MJ07 72 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 MAPKAPK5-AS1Q8N8E1 139 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 IFI27L1Q96BM0 104 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 C1orf147Q96MC9 270 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-201ENST00000258733 TMEM243Q9BU79 118 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 CCL24O00175 119 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 IGLV3-27P01718 113 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 GRPP07492 148 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 NCBP2P52298 156 aaKnown RBP eCLIP6.01□□□□□ -1.45
GPNMB-201ENST00000258733 CIRBPQ14011 172 aaKnown RBP6.01□□□□□ -1.45
GPNMB-201ENST00000258733 KIAA1549LQ6ZVL6 1849 aa6.01□□□□□ -1.45
GPNMB-201ENST00000258733 IGLV2-8P01709 118 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 IFI6P09912 130 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 FAM104BQ5XKR9 115 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 C20orf204Q6ZNR8 217 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 PRSS3P2Q8NHM4 247 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 DCANP1Q8TF63 244 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 SMIM14Q96QK8 99 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 CENPFP49454 3210 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 TRBV7-6A0A0J9YX20 115 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 PLXNB1O43157 2135 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms