RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 CSN1S1P47710 185 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 VGLL1Q99990 258 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 MUC21A0A0G2JKD1 596 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 CENPVL3A0A0U1RRI6 287 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 MUC21A0A140T8X8 626 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 CSN3P07498 182 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 CT45A10P0DMU9 189 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 PSG9Q00887 426 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.35
UBQLN1-201ENST00000257468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.35
UBQLN1-201ENST00000257468 SH2D1AO60880 128 aa12.83□□□□□ -0.35
UBQLN1-201ENST00000257468 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 BATFQ16520 125 aa12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 TMEM190Q8WZ59 177 aa12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 CCDC140Q96MF4 163 aa12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.36
UBQLN1-201ENST00000257468 PKD1L2Q7Z442 2459 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 LINC00614P0C842 121 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 ZNF80P51504 273 aaPredicted RBP12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 RIGQ13278 110 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 TXN2Q99757 166 aa12.82□□□□□ -0.36
UBQLN1-201ENST00000257468 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 TMEM213A2RRL7 107 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 LYZL1Q6UWQ5 148 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 PRR25Q96S07 402 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 CFAP46Q8IYW2 2715 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 ZNF207O43670 478 aaKnown RBP12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 RNF182Q8N6D2 247 aa12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 TIMM8BQ9Y5J9 83 aaPredicted RBP12.81□□□□□ -0.36
UBQLN1-201ENST00000257468 MAP1AP78559 2803 aaPredicted RBP12.8□□□□□ -0.36
UBQLN1-201ENST00000257468 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
UBQLN1-201ENST00000257468 FAM162BQ5T6X4 162 aa12.8□□□□□ -0.36
UBQLN1-201ENST00000257468 C5orf56Q8N8D9 126 aa12.8□□□□□ -0.36
UBQLN1-201ENST00000257468 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
UBQLN1-201ENST00000257468 CLPSL1A2RUU4 121 aa12.79□□□□□ -0.36
UBQLN1-201ENST00000257468 ERCC8Q13216 396 aa12.79□□□□□ -0.36
UBQLN1-201ENST00000257468 TMEM70Q9BUB7 260 aa12.79□□□□□ -0.36
UBQLN1-201ENST00000257468 TCAPO15273 167 aa12.79□□□□□ -0.36
UBQLN1-201ENST00000257468 MRPL52Q86TS9 123 aaKnown RBP12.79□□□□□ -0.36
UBQLN1-201ENST00000257468 MCRIP2Q9BUT9 160 aaKnown RBP12.79□□□□□ -0.36
UBQLN1-201ENST00000257468 IGHV4-61A0A0C4DH41 118 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 BUB3O43684 328 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 LEPROTL1O95214 131 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 Q6ZN92 141 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 UQCR10Q9UDW1 63 aa12.78□□□□□ -0.36
UBQLN1-201ENST00000257468 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.36
UBQLN1-201ENST00000257468 G0S2P27469 103 aa12.77□□□□□ -0.36
UBQLN1-201ENST00000257468 TP73-AS1Q9UF72 201 aa12.77□□□□□ -0.36
UBQLN1-201ENST00000257468 H0Y8G0 127 aa12.77□□□□□ -0.37
UBQLN1-201ENST00000257468 IGLL1P15814 213 aa12.77□□□□□ -0.37
UBQLN1-201ENST00000257468 SAPCD1Q5SSQ6 148 aa12.77□□□□□ -0.37
UBQLN1-201ENST00000257468 Q6AWC8 147 aa12.77□□□□□ -0.37
UBQLN1-201ENST00000257468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.77□□□□□ -0.37
UBQLN1-201ENST00000257468 GATD1Q8NB37 220 aa12.77□□□□□ -0.37
UBQLN1-201ENST00000257468 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 SYS1-DBNDD2H3BUS1 97 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 ZNF575Q86XF7 245 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 AMN1Q8IY45 258 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 GOSR1O95249 250 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 PAX8Q06710 450 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 KLK9Q2XQG4 91 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 FAM106AQ4KMX7 169 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 EEF1AKMT3Q96AZ1 226 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 KLK9Q9UKQ9 250 aa12.76□□□□□ -0.37
UBQLN1-201ENST00000257468 UTP20O75691 2785 aaKnown RBP12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 D6R8Y8 96 aa12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 M0QZK8 103 aa12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 RPLP1P05386 114 aaKnown RBP12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 TFPI2P48307 235 aa12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 COX8CQ7Z4L0 72 aa12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 CSMD2Q7Z408 3487 aa12.75□□□□□ -0.37
UBQLN1-201ENST00000257468 IGHV4-38-2P0DP08 117 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 HNRNPA3P51991 378 aaKnown RBP12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 ZNF493Q6ZR52 646 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 FLNCQ14315 2725 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 A0A1B0GW15 77 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 KLHDC1Q8N7A1 406 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 CCL19Q99731 98 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 MOB4Q9Y3A3 225 aa12.74□□□□□ -0.37
UBQLN1-201ENST00000257468 CRYBG3Q68DQ2 2970 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms