RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 RCHY1Q96PM5 261 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 MRPL35Q9NZE8 188 aaKnown RBP10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 TCTEX1D4Q5JR98 221 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 PRSS46E5RG02 174 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 G3V4G9 280 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 PDLIM4P50479 330 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 LYPD6BQ8NI32 183 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 PLCE1Q9P212 2302 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 C10orf55Q5SWW7 151 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 Q8TAT8 98 aa10.71□□□□□ -0.69
PCDHGA3-201ENST00000253812 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.7
PCDHGA3-201ENST00000253812 HAX1O00165 279 aa10.71□□□□□ -0.7
PCDHGA3-201ENST00000253812 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.7
PCDHGA3-201ENST00000253812 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 TMEM133Q9H2Q1 129 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 CADP27708 2225 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 HLA-DRB4P13762 266 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 LINC00477Q96M19 166 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 C9orf139Q6ZV77 190 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 IGLV3-12A0A075B6K2 115 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 IGLL5B9A064 214 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 RPL36AP83881 106 aaKnown RBP10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 PDE6HQ13956 83 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 RPL36ALQ969Q0 106 aaKnown RBP10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 COL4A6Q14031 1691 aa10.7□□□□□ -0.7
PCDHGA3-201ENST00000253812 SIGLEC15Q6ZMC9 328 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 IGKV1-27A0A075B6S5 117 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 INS-IGF2F8WCM5 200 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 INSP01308 110 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 CFC1BP0CG36 223 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 CFC1P0CG37 223 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 ZIC4Q8N9L1 334 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 TMEM243Q9BU79 118 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 ZNF747Q9BV97 191 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 KNCNA6PVL3 124 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 C1orf159Q96HA4 380 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 TRAV3A0A0B4J244 114 aa10.69□□□□□ -0.7
PCDHGA3-201ENST00000253812 TRGV4A0A0C4DH28 118 aa10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 SRRM4A7MD48 611 aaKnown RBP10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 WFDC2Q14508 124 aa10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 VOPP1Q96AW1 172 aa10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 THADAQ6YHU6 1953 aa10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 F8WEM9 126 aa10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 MRPL51Q4U2R6 128 aaKnown RBP10.68□□□□□ -0.7
PCDHGA3-201ENST00000253812 GBF1Q92538 1859 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 PCNTO95613 3336 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 FAM236AA0A1B0GUQ0 79 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 FAM236BA0A1B0GV22 79 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 TAX1BP3O14907 124 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 PAX9P55771 341 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 PAX8Q06710 450 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 TP53BP1Q12888 1972 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 APOBEC3AP31941 199 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 ERCC8Q13216 396 aa10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 KLF5Q13887 457 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA3-201ENST00000253812 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 DEFB104AQ8WTQ1 72 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 MGAMO43451 1857 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 LINC00473A8K010 186 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 RNASE2P10153 161 aaKnown RBP10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 ZFP36L1Q07352 338 aaKnown RBP10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 Q8NFD4 153 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 PSPNO60542 156 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 NDUFS7O75251 213 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 FOXI1Q12951 378 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 DUX4L9Q6RFH8 374 aaPredicted RBP10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 J3QQQ9 107 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 C5orf47Q569G3 176 aa10.66□□□□□ -0.7
PCDHGA3-201ENST00000253812 PRR19A6NJB7 356 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 PCP2Q8IVA1 136 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 IGLV3-32A0A0A0MS00 114 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 A0A1B0GX51 115 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 C17orf100A8MU93 164 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 CDK2AP2O75956 126 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 C17orf82Q86X59 251 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 TRBV25-1A0A075B6N4 114 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 CD24P25063 80 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 WIPF2Q8TF74 440 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 DKK2Q9UBU2 259 aa10.65□□□□□ -0.7
PCDHGA3-201ENST00000253812 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.71
PCDHGA3-201ENST00000253812 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.71
PCDHGA3-201ENST00000253812 TRPT1Q86TN4 253 aaKnown RBP10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 PEMTQ9UBM1 199 aa10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 A0A087WX48 190 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms