RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
ZC3H4-201ENST00000253048 IGHV7-4-1A0A0J9YVY3 117 aa11.5□□□□□ -0.57
ZC3H4-201ENST00000253048 PRSS29PA6NIE9 313 aa11.5□□□□□ -0.57
ZC3H4-201ENST00000253048 SHISA9B4DS77 424 aa11.5□□□□□ -0.57
ZC3H4-201ENST00000253048 SOCS3O14543 225 aa11.5□□□□□ -0.57
ZC3H4-201ENST00000253048 PRORYQ9H606 182 aa11.5□□□□□ -0.57
ZC3H4-201ENST00000253048 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 OTOFQ9HC10 1997 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 COL4A6Q14031 1691 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 PMVKQ15126 192 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 NOP10Q9NPE3 64 aaKnown RBP11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 INTS1Q8N201 2190 aaKnown RBP11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 LINC00473A8K010 186 aa11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
ZC3H4-201ENST00000253048 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 DAZAP2Q15038 168 aaPredicted RBP11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 ADORA2A-AS1P86434 159 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 RHOHQ15669 191 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 C1orf194Q5T5A4 169 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 SPXQ9BT56 116 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 CRLF1O75462 422 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 IGKV1-16P04430 117 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
ZC3H4-201ENST00000253048 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 MYCNOSP40205 109 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 SEC61GP60059 68 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 YPEL3P61236 119 aaPredicted RBP11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 D6R8Y8 96 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 CT83Q5H943 113 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 A0A087WV48 116 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 ATP5G1P05496 136 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 SLURP1P55000 103 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 IGKV1-39P01597 117 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 IGKV1D-39P04432 117 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 RNASE2P10153 161 aaKnown RBP11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 MDC1Q14676 2089 aaKnown RBP11.47□□□□□ -0.57
ZC3H4-201ENST00000253048 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 TIRAPP58753 221 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 PUSL1Q8N0Z8 303 aaKnown RBP11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 SMPXQ9UHP9 88 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 RLFQ13129 1914 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 IGLL5B9A064 214 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 NMSQ5H8A3 153 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 ZNF833PQ6ZTB9 187 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 ZNF318Q5VUA4 2279 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 I3L3M4 83 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 MPZP25189 248 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 PDE6HQ13956 83 aa11.46□□□□□ -0.57
ZC3H4-201ENST00000253048 HAMPP81172 84 aa11.46□□□□□ -0.58
ZC3H4-201ENST00000253048 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.58
ZC3H4-201ENST00000253048 ZNF503Q96F45 646 aa11.46□□□□□ -0.58
ZC3H4-201ENST00000253048 IGKV1D-8A0A087WSZ0 117 aa11.46□□□□□ -0.58
ZC3H4-201ENST00000253048 LINC01559Q495D7 138 aa11.46□□□□□ -0.58
ZC3H4-201ENST00000253048 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 PFN2P35080 140 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 IFI27L1Q96BM0 104 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 UBL5Q9BZL1 73 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 Q6ZQT7 251 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 HEATR5BQ9P2D3 2071 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 IGHV1-24A0A0C4DH33 117 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 ID3Q02535 119 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 MRPL23Q16540 153 aaKnown RBP11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 SCN8AQ9UQD0 1980 aa11.45□□□□□ -0.58
ZC3H4-201ENST00000253048 IGHV2-70P01814 119 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 SIP14410 1827 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 FOXL2NBQ6ZUU3 175 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 DSCR8Q96T75 97 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 ATP6V0BQ99437 205 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 SH2D6Q7Z4S9 175 aa11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 CHCHD1Q96BP2 118 aaKnown RBP11.44□□□□□ -0.58
ZC3H4-201ENST00000253048 IGLV1-44P01699 117 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 EGR2P11161 476 aaPredicted RBP11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 SAMD5Q5TGI4 173 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 NXPH4O95158 308 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 RNF144BQ7Z419 303 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 BAALCQ8WXS3 180 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 INAFM1C9JVW0 142 aa11.43□□□□□ -0.58
ZC3H4-201ENST00000253048 Q6ZR03 302 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms