RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PSG3Q16557 428 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 ZNF492Q9P255 531 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 ZNF580Q9UK33 172 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 U3KQE9 123 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 IGHV3-11P01762 117 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 IGFL4Q6B9Z1 124 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 HIST3H2BBQ8N257 126 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 TEX29Q8N6K0 151 aa17.92■□□□□ 0.46
SYNGR3-201ENST00000248121 IGHV3-49A0A0A0MS15 119 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 PSG8Q9UQ74 426 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 HIVEP1P15822 2718 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 ZNF253O75346 499 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 HLA-DMBP28068 263 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 RAB9AP51151 201 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 GPR61Q9BZJ8 451 aa17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 ZNF331Q9NQX6 463 aaPredicted RBP17.91■□□□□ 0.46
SYNGR3-201ENST00000248121 A0A087X0K7 114 aa17.9■□□□□ 0.46
SYNGR3-201ENST00000248121 UNQ9165/PRO28630Q6UXU0 137 aa17.9■□□□□ 0.46
SYNGR3-201ENST00000248121 METTL26Q96S19 204 aa17.9■□□□□ 0.46
SYNGR3-201ENST00000248121 NPFFR1Q9GZQ6 430 aa17.9■□□□□ 0.46
SYNGR3-201ENST00000248121 NF1P21359 2839 aa17.9■□□□□ 0.46
SYNGR3-201ENST00000248121 HIVEP2P31629 2446 aa17.89■□□□□ 0.46
SYNGR3-201ENST00000248121 PDZD11Q5EBL8 140 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 IZUMO1RA6ND01 250 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 K7EQM0 130 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 COA6Q5JTJ3 125 aaKnown RBP17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 C1orf194Q5T5A4 169 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 TSKUQ8WUA8 353 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 ZC2HC1AQ96GY0 325 aa17.89■□□□□ 0.45
SYNGR3-201ENST00000248121 BAHCC1Q9P281 2608 aa17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 XKRY2A2RUG3 117 aa17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 S100A8P05109 93 aa17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 NUP35Q8NFH5 326 aa17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 NEU1Q99519 415 aa17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 RPP21Q9H633 154 aaKnown RBP17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 ZFP30Q9Y2G7 519 aa17.88■□□□□ 0.45
SYNGR3-201ENST00000248121 FAM181BA6NEQ2 426 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 MRPL54Q6P161 138 aaKnown RBP17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 OR4X2Q8NGF9 303 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 MRPL18Q9H0U6 180 aaKnown RBP17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 IGKV2-40A0A087WW87 121 aaPredicted RBP17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 SNURFLB1AK76 121 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 NPIPB6E9PJ23 425 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 CHEK1O14757 476 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 IGKV2D-40P01614 121 aaPredicted RBP17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 MEOX2P50222 304 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 GNB1LQ9BYB4 327 aa17.87■□□□□ 0.45
SYNGR3-201ENST00000248121 ZNF705FA8MVS1 300 aaPredicted RBP17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 P01737 135 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 CSN1S1P47710 185 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 TMEM136Q6ZRR5 245 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 ARL6IP6Q8N6S5 226 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 C12orf57Q99622 126 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 NDUFA4O00483 81 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 PSMB8P28062 276 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 TMEM86BQ8N661 226 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 TMEM160Q9NX00 188 aa17.86■□□□□ 0.45
SYNGR3-201ENST00000248121 HIGD1CA8MV81 97 aa17.85■□□□□ 0.45
SYNGR3-201ENST00000248121 CT83Q5H943 113 aa17.85■□□□□ 0.45
SYNGR3-201ENST00000248121 C16orf54Q6UWD8 224 aa17.85■□□□□ 0.45
SYNGR3-201ENST00000248121 NAT8BQ9UHF3 227 aa17.85■□□□□ 0.45
SYNGR3-201ENST00000248121 A0A0G2JLM5 398 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 SERTM2A0A1B0GWG4 89 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 SRD5A1P18405 259 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 CRIP1P50238 77 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 GBGT1Q8N5D6 347 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 GTSF1Q8WW33 167 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 C8orf49Q96NF6 230 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 TCF24Q7RTU0 167 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 Q8N2B8 174 aa17.84■□□□□ 0.45
SYNGR3-201ENST00000248121 LCN12Q6JVE5 192 aa17.83■□□□□ 0.45
SYNGR3-201ENST00000248121 RNF182Q8N6D2 247 aa17.83■□□□□ 0.45
SYNGR3-201ENST00000248121 GLMPQ8WWB7 406 aa17.83■□□□□ 0.45
SYNGR3-201ENST00000248121 DAZAP1Q96EP5 407 aaKnown RBP17.83■□□□□ 0.45
SYNGR3-201ENST00000248121 VGLL1Q99990 258 aa17.83■□□□□ 0.45
SYNGR3-201ENST00000248121 A0A1B0GUS0 222 aa17.83■□□□□ 0.44
SYNGR3-201ENST00000248121 HIST2H2BDQ6DRA6 164 aa17.83■□□□□ 0.44
SYNGR3-201ENST00000248121 Q6ZSV7 163 aa17.83■□□□□ 0.44
SYNGR3-201ENST00000248121 TRAV8-2A0A0B4J237 113 aa17.82■□□□□ 0.44
SYNGR3-201ENST00000248121 CYSRT1A8MQ03 144 aa17.82■□□□□ 0.44
SYNGR3-201ENST00000248121 INAFM1C9JVW0 142 aa17.82■□□□□ 0.44
SYNGR3-201ENST00000248121 RPLP1P05386 114 aaKnown RBP17.82■□□□□ 0.44
SYNGR3-201ENST00000248121 RPL19P84098 196 aaKnown RBP17.82■□□□□ 0.44
SYNGR3-201ENST00000248121 WDR73Q6P4I2 378 aa17.82■□□□□ 0.44
SYNGR3-201ENST00000248121 A8MWL6 223 aa17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 PRAC2D3DTV9 90 aa17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 GDF5OSQ5U4N7 250 aa17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 HIST1H2BLQ99880 126 aa17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 NSD1Q96L73 2696 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 SMIM6P0DI80 62 aa17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 WIPF2Q8TF74 440 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 SLC50A1Q9BRV3 221 aa17.81■□□□□ 0.44
SYNGR3-201ENST00000248121 GRIFINA4D1Z8 144 aa17.8■□□□□ 0.44
SYNGR3-201ENST00000248121 MT-ND6P03923 174 aa17.8■□□□□ 0.44
SYNGR3-201ENST00000248121 COX19Q49B96 90 aa17.8■□□□□ 0.44
SYNGR3-201ENST00000248121 C8orf86Q6ZUL3 223 aa17.8■□□□□ 0.44
SYNGR3-201ENST00000248121 SETXQ7Z333 2677 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-201ENST00000248121 GZMBP10144 247 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms