RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 LYRM7Q5U5X0 104 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 Q8TCH9 128 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 TANC2Q9HCD6 1990 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 IGHV2-70DA0A0C4DH43 119 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 A0A1W2PPI3 338 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 P0C879 139 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 IFI27P40305 119 aaPredicted RBP7.44□□□□□ -1.22
COL21A1-201ENST00000244728 LINC00173Q6ZV60 143 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 TTC9CQ8N5M4 171 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 OR5A1Q8NGJ0 315 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
COL21A1-201ENST00000244728 IGLV3-9A0A075B6K5 115 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 CDKN1BP46527 198 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 SMAGPQ0VAQ4 97 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 C5orf64Q2M2E5 130 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 SAMD5Q5TGI4 173 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 OR9G4Q8NGQ1 327 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 TPSG1Q9NRR2 321 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 CPAMD8Q8IZJ3 1885 aa7.44□□□□□ -1.22
COL21A1-201ENST00000244728 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 IGLV1-44P01699 117 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 PSMB2P49721 201 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 MORN5Q5VZ52 161 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 LYZL1Q6UWQ5 148 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 Q86TA4 180 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 TRGV9Q99603 122 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 UNC80Q8N2C7 3258 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 IGKV2-40A0A087WW87 121 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 A0A1B0GWB2 263 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 OR11H12B2RN74 326 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 IGKV2D-40P01614 121 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 SSBP2P81877 361 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 OR11H1Q8NG94 326 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 OR11H2Q8NH07 326 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 Q8TAT8 98 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 ITLN2Q8WWU7 325 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 NDUFA4L2Q9NRX3 87 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 ATG2AQ2TAZ0 1938 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 EVI2AP22794 236 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 RAB9AP51151 201 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 WT1-ASQ06250 92 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 ZNF56Q15929 161 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 Q5PR19 223 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 AMN1Q8IY45 258 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 LOXP28300 417 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 SAA4P35542 130 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 SNRPD3P62318 126 aaKnown RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 BCL6BQ8N143 479 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-201ENST00000244728 YAE1D1Q9NRH1 226 aa7.43□□□□□ -1.22
COL21A1-201ENST00000244728 SMKR1H3BMG3 65 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 RNASE4P34096 147 aaKnown RBP7.42□□□□□ -1.22
COL21A1-201ENST00000244728 CFHR2P36980 270 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 FAM169BQ8N8A8 192 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 TNFRSF14Q92956 283 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 FXYD5Q96DB9 178 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 HCFC1P51610 2035 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 A0A1B0GV72 72 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 HERVK_113P61574 105 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 RUSC1-AS1Q66K80 236 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 SFTA2Q6UW10 78 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 SPRY4Q9C004 299 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 PTPRSQ13332 1948 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 H7C2G1 150 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 PRSS2P07478 247 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 OR1N2Q8NGR9 330 aa7.42□□□□□ -1.22
COL21A1-201ENST00000244728 WIPF2Q8TF74 440 aaPredicted RBP7.42□□□□□ -1.22
COL21A1-201ENST00000244728 IGKV1OR2-108A0A075B7D4 117 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 TMEM238LA0A1B0GVL6 79 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 A6NJY4 79 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 NDUFA3O95167 84 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 TMEM155Q4W5P6 130 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 RNF114Q9Y508 228 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 PROP1O75360 226 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 CEACAM4O75871 244 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 ATP5LO75964 103 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 KLF5Q13887 457 aaPredicted RBP7.41□□□□□ -1.22
COL21A1-201ENST00000244728 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 GFRA4Q9GZZ7 299 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 GTSF1LQ9H1H1 148 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 ZNF492Q9P255 531 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 G3V318 75 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 COX8AP10176 69 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 NBL1P41271 181 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 CT83Q5H943 113 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 PVRIGQ6DKI7 326 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 DEFB125Q8N687 156 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 TRAV41A0A0B4J266 112 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 FABP5P3A8MUU1 101 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 EMP1P54849 157 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 PAX2Q02962 417 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 IGF2BP2-AS1Q96M15 143 aa7.41□□□□□ -1.22
COL21A1-201ENST00000244728 MRPL16Q9NX20 251 aaKnown RBP7.41□□□□□ -1.22
COL21A1-201ENST00000244728 TMEM213A2RRL7 107 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 PRTN3P24158 256 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 PAX8Q06710 450 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 POU2AF1Q16633 256 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 PRSS57Q6UWY2 283 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 ZNF479Q96JC4 524 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 SIGMAR1Q99720 223 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 TP73-AS1Q9UF72 201 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms