RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RBPMS2Q6ZRY4 209 aaKnown RBP6.14□□□□□ -1.43
CXCR4-201ENST00000241393 Q86TA4 180 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 Q8N976 141 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 OR4F17Q8NGA8 305 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 ALKBH7Q9BT30 221 aaPredicted RBP6.14□□□□□ -1.43
CXCR4-201ENST00000241393 ZFP30Q9Y2G7 519 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 MINOS1-NBL1R4GNA1 71 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 PLXNB1O43157 2135 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 TRBV19A0A075B6N1 114 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 A0A1B0GV90 55 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 SERTM2A0A1B0GWG4 89 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 K7EQM0 130 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 SCGB2A1O75556 95 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 SNRPCP09234 159 aaKnown RBP6.13□□□□□ -1.43
CXCR4-201ENST00000241393 IGLC2P0DOY2 106 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 CDKN1AP38936 164 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 CAMPP49913 170 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 FOXA3P55318 350 aaPredicted RBP6.13□□□□□ -1.43
CXCR4-201ENST00000241393 NUTF2P61970 127 aaKnown RBP6.13□□□□□ -1.43
CXCR4-201ENST00000241393 PDE6HQ13956 83 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 EBI3Q14213 229 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 C5orf64Q2M2E5 130 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 LDLRAD2Q5SZI1 272 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 GDF5OSQ5U4N7 250 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 ZNF562Q6V9R5 426 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 NIT1Q86X76 327 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 TMEM75Q8N9X5 138 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 VN1R17PQ8TDU5 208 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 URB1-AS1Q96HZ7 61 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 RCHY1Q96PM5 261 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 CEP295Q9C0D2 2601 aa6.13□□□□□ -1.43
CXCR4-201ENST00000241393 TLN1Q9Y490 2541 aaKnown RBP6.12□□□□□ -1.43
CXCR4-201ENST00000241393 IGLV11-55A0A075B6I3 123 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 A0A1B0GW15 77 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 WI2-2373I1.2A0A1W2PRP0 233 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 C20orf202A1L168 122 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 FBLL1A6NHQ2 334 aaKnown RBP6.12□□□□□ -1.43
CXCR4-201ENST00000241393 HSBP1O75506 76 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 IGLV2-11P01706 119 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 PMCHP20382 165 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 S100A7P31151 101 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 DLX1P56177 255 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 KRTDAPP60985 99 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 Q6AWC8 147 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 ZNF491Q8N8L2 437 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 GATD1Q8NB37 220 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 BORCS7Q96B45 105 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 BOD1L1Q8NFC6 3051 aa6.12□□□□□ -1.43
CXCR4-201ENST00000241393 IGHV3-21A0A0B4J1V1 117 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 MRPS12O15235 138 aaKnown RBP6.11□□□□□ -1.43
CXCR4-201ENST00000241393 GAGE7O76087 117 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 HLA-DRB1P01911 266 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 C3orf79P0CE67 100 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 APELAP0DMC3 54 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 CTRLP40313 264 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 MFAP4P55083 255 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 ARF6P62330 175 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 GAGE1Q13065 139 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 GAGE4Q13068 117 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 LEMD1Q68G75 181 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 SIGLEC15Q6ZMC9 328 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 LINC00322Q6ZN03 302 aaPredicted RBP6.11□□□□□ -1.43
CXCR4-201ENST00000241393 TTC9CQ8N5M4 171 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 Q8N6K4 173 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 KLHDC1Q8N7A1 406 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 CHCHD1Q96BP2 118 aaKnown RBP6.11□□□□□ -1.43
CXCR4-201ENST00000241393 NDFIP1Q9BT67 221 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 FAM103A1Q9BTL3 118 aaKnown RBP6.11□□□□□ -1.43
CXCR4-201ENST00000241393 C1RLQ9NZP8 487 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 THYN1Q9P016 225 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 RPH3ALQ9UNE2 315 aa6.11□□□□□ -1.43
CXCR4-201ENST00000241393 FCGR2BP31994 310 aaPredicted RBP6.1□□□□□ -1.43
CXCR4-201ENST00000241393 KLK9Q2XQG4 91 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 GOLT1AQ6ZVE7 132 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 TCF24Q7RTU0 167 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 GTSF1Q8WW33 167 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 ARPC1AQ92747 370 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 TXN2Q99757 166 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 KLK9Q9UKQ9 250 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 VCYO14598 125 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 GNG7O60262 68 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 IL4P05112 153 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 PRSS2P07478 247 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 OR5AL1P0C617 328 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 PRB3Q04118 309 aaPredicted RBP6.1□□□□□ -1.43
CXCR4-201ENST00000241393 PSG3Q16557 428 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 ZNF705AQ6ZN79 300 aaPredicted RBP6.1□□□□□ -1.43
CXCR4-201ENST00000241393 COX8CQ7Z4L0 72 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 VMO1Q7Z5L0 202 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 OR2D3Q8NGH3 330 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 ZNF414Q96IQ9 312 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 C21orf62Q9NYP8 219 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 UQCR10Q9UDW1 63 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 PSG8Q9UQ74 426 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 HILPDAQ9Y5L2 63 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms