RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PSG3Q16557 428 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 EXOC3-AS1Q8N2X6 119 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 LYPD1Q8N2G4 141 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 SPATA3Q8NHX4 192 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 PRNTQ86SH4 94 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 GLMPQ8WWB7 406 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 TRBV19A0A075B6N1 114 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF727A8MUV8 499 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 MEF2BQ02080 365 aaPredicted RBP8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 URGCP-MRPS24S4R325 110 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 HTN1P15515 57 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 RPL35AP18077 110 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 SNRPEP62304 92 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 HIST1H2BAQ96A08 127 aa8.45□□□□□ -1.06
TNFAIP3-201ENST00000237289 FHL3Q13643 280 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 COL6A5A8TX70 2615 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 S100PP25815 95 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 PRR27Q6MZM9 219 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 CSMD2Q7Z408 3487 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 GPX1P07203 203 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 GNG4P50150 75 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 NDUFA6P56556 154 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 RNF182Q8N6D2 247 aa8.44□□□□□ -1.06
TNFAIP3-201ENST00000237289 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 SGK494Q96LW2 274 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF414Q96IQ9 312 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 NIPSNAP3BQ9BS92 247 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF586Q9NXT0 402 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 NAGKQ9UJ70 344 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 BAGE2Q86Y30 109 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 H3BQ15 152 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 M0R3E3 92 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 NMBP08949 121 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 CBLN2Q8IUK8 224 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 EPDR1Q9UM22 224 aa8.43□□□□□ -1.06
TNFAIP3-201ENST00000237289 TSTD3H0UI37 97 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 PRR25Q96S07 402 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 TRAV1-1A0A0B4J248 108 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 PEX7O00628 323 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 PRB4P10163 310 aaPredicted RBP8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 FXYD5Q96DB9 178 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 C17orf77Q96MU5 243 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 NDUFB4O95168 129 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 GNG5P63218 68 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 OR5I1Q13606 314 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
TNFAIP3-201ENST00000237289 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 ATP5G3P48201 142 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF331Q9NQX6 463 aaPredicted RBP8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 FBLL1A6NHQ2 334 aaKnown RBP8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 RPL19P84098 196 aaKnown RBP8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 WIPF2Q8TF74 440 aaPredicted RBP8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 SIGLEC8Q9NYZ4 499 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 G0S2P27469 103 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 ADIRFQ15847 76 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 APRG1Q8IVJ8 170 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 C1QTNF4Q9BXJ3 329 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 SLC35B3Q9H1N7 401 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
TNFAIP3-201ENST00000237289 ADARB2-AS1A8MUL3 147 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 EDN2P20800 178 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 IGKV2-40A0A087WW87 121 aaPredicted RBP8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 FAM74A7A6NL05 159 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 ZNF253O75346 499 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 IGKV2D-40P01614 121 aaPredicted RBP8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 LEPP41159 167 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 CCL20P78556 96 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 NIPBLQ6KC79 2804 aaeCLIP8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 TRAV34A0A0B4J273 112 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 XKRY2A2RUG3 117 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 APOC4P55056 127 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 BORCS7Q96B45 105 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 RARRES2Q99969 163 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 SRD5A3Q9H8P0 318 aa8.4□□□□□ -1.06
TNFAIP3-201ENST00000237289 SORL1Q92673 2214 aa8.4□□□□□ -1.07
TNFAIP3-201ENST00000237289 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.07
TNFAIP3-201ENST00000237289 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.07
TNFAIP3-201ENST00000237289 U3KQE9 123 aa8.4□□□□□ -1.07
TNFAIP3-201ENST00000237289 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 ZNF705DP0CH99 300 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms