RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PYGO2Q9BRQ0 406 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 NOTCH2Q04721 2471 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 IGHV4OR15-8A0A075B7B6 117 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 A0A087WW49 117 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 SAMD13Q5VXD3 122 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 C1QL4Q86Z23 238 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 PSG8Q9UQ74 426 aa18.13■□□□□ 0.49
RRP9-201ENST00000232888 TCTEX1D4Q5JR98 221 aa18.12■□□□□ 0.49
RRP9-201ENST00000232888 IBA57Q5T440 356 aaKnown RBP18.12■□□□□ 0.49
RRP9-201ENST00000232888 LCN12Q6JVE5 192 aa18.12■□□□□ 0.49
RRP9-201ENST00000232888 ZNF492Q9P255 531 aa18.12■□□□□ 0.49
RRP9-201ENST00000232888 HIVEP2P31629 2446 aa18.11■□□□□ 0.49
RRP9-201ENST00000232888 TRAV9-1A0A075B6T8 112 aa18.11■□□□□ 0.49
RRP9-201ENST00000232888 RBAKDNA6NC62 111 aa18.11■□□□□ 0.49
RRP9-201ENST00000232888 HOXD3P31249 432 aaPredicted RBP18.11■□□□□ 0.49
RRP9-201ENST00000232888 FAM210BQ96KR6 192 aa18.11■□□□□ 0.49
RRP9-201ENST00000232888 IL36BQ9NZH7 164 aa18.11■□□□□ 0.49
RRP9-201ENST00000232888 V9GYV3 84 aa18.11■□□□□ 0.49
RRP9-201ENST00000232888 TGIF2-C20orf24A0A0A6YYL0 155 aa18.1■□□□□ 0.49
RRP9-201ENST00000232888 CXCL1P09341 107 aa18.1■□□□□ 0.49
RRP9-201ENST00000232888 PRNTQ86SH4 94 aa18.1■□□□□ 0.49
RRP9-201ENST00000232888 NHLRC2Q8NBF2 726 aa18.1■□□□□ 0.49
RRP9-201ENST00000232888 LINC01006Q8NI28 216 aa18.1■□□□□ 0.49
RRP9-201ENST00000232888 SGK494Q96LW2 274 aa18.1■□□□□ 0.49
RRP9-201ENST00000232888 TRAV8-1A0A0A6YYK1 113 aa18.09■□□□□ 0.49
RRP9-201ENST00000232888 LINC01619G3V211 115 aa18.09■□□□□ 0.49
RRP9-201ENST00000232888 KLF5Q13887 457 aaPredicted RBP18.09■□□□□ 0.49
RRP9-201ENST00000232888 NRN1Q9NPD7 142 aa18.09■□□□□ 0.49
RRP9-201ENST00000232888 TRAV8-2A0A0B4J237 113 aa18.08■□□□□ 0.49
RRP9-201ENST00000232888 TMEM213A2RRL7 107 aa18.08■□□□□ 0.49
RRP9-201ENST00000232888 SAPCD1Q5SSQ6 148 aa18.08■□□□□ 0.49
RRP9-201ENST00000232888 C16orf92Q96LL3 132 aa18.08■□□□□ 0.49
RRP9-201ENST00000232888 RNASE7Q9H1E1 156 aaKnown RBP18.08■□□□□ 0.49
RRP9-201ENST00000232888 DPF1Q92782 380 aa18.08■□□□□ 0.48
RRP9-201ENST00000232888 MLXQ9UH92 298 aa18.08■□□□□ 0.48
RRP9-201ENST00000232888 SYNJ2BPP57105 145 aa18.07■□□□□ 0.48
RRP9-201ENST00000232888 COX8CQ7Z4L0 72 aa18.07■□□□□ 0.48
RRP9-201ENST00000232888 OR1N2Q8NGR9 330 aa18.07■□□□□ 0.48
RRP9-201ENST00000232888 OTOGQ6ZRI0 2925 aa18.07■□□□□ 0.48
RRP9-201ENST00000232888 C1orf196B1AJZ1 125 aa18.06■□□□□ 0.48
RRP9-201ENST00000232888 INAFM1C9JVW0 142 aa18.06■□□□□ 0.48
RRP9-201ENST00000232888 GATCO43716 136 aaKnown RBP18.06■□□□□ 0.48
RRP9-201ENST00000232888 NUDT10Q8NFP7 164 aa18.06■□□□□ 0.48
RRP9-201ENST00000232888 NUDT11Q96G61 164 aa18.06■□□□□ 0.48
RRP9-201ENST00000232888 A0A1W2PPQ1 181 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 ZNF705GA8MUZ8 300 aaPredicted RBP18.05■□□□□ 0.48
RRP9-201ENST00000232888 SOCS3O14543 225 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 TCF21O43680 179 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 TYMSP04818 313 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 HLA-DMBP28068 263 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 RPS10P46783 165 aaKnown RBP18.05■□□□□ 0.48
RRP9-201ENST00000232888 KHDC1LQ5JSQ8 128 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 IGFL4Q6B9Z1 124 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 KLHL30-AS1Q8NEE0 82 aa18.05■□□□□ 0.48
RRP9-201ENST00000232888 DAZAP1Q96EP5 407 aaKnown RBP18.05■□□□□ 0.48
RRP9-201ENST00000232888 IGKV2-40A0A087WW87 121 aaPredicted RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 C19orf71A6NCJ1 209 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 M0QZ24 198 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 IGKV2D-40P01614 121 aaPredicted RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 TCF24Q7RTU0 167 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 OR11H1Q8NG94 326 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 ANK3Q12955 4377 aaKnown RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 ZNF705FA8MVS1 300 aaPredicted RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 FAM3BP58499 235 aaPredicted RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 RPL11P62913 178 aaKnown RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 RPL19P84098 196 aaKnown RBP18.04■□□□□ 0.48
RRP9-201ENST00000232888 CT83Q5H943 113 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 PRR27Q6MZM9 219 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 GBGT1Q8N5D6 347 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 RNF182Q8N6D2 247 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 SRD5A3Q9H8P0 318 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 PEMTQ9UBM1 199 aa18.04■□□□□ 0.48
RRP9-201ENST00000232888 RAB5BP61020 215 aa18.03■□□□□ 0.48
RRP9-201ENST00000232888 C18orf65Q6ZTR6 163 aa18.03■□□□□ 0.48
RRP9-201ENST00000232888 OR4B1Q8NGF8 309 aa18.03■□□□□ 0.48
RRP9-201ENST00000232888 NDFIP1Q9BT67 221 aa18.03■□□□□ 0.48
RRP9-201ENST00000232888 TSSC4Q9Y5U2 329 aaPredicted RBP18.03■□□□□ 0.48
RRP9-201ENST00000232888 C2orf70A6NJV1 201 aa18.02■□□□□ 0.48
RRP9-201ENST00000232888 CRLF1O75462 422 aa18.02■□□□□ 0.48
RRP9-201ENST00000232888 CT45A10P0DMU9 189 aa18.02■□□□□ 0.48
RRP9-201ENST00000232888 CBLN1P23435 193 aa18.02■□□□□ 0.48
RRP9-201ENST00000232888 Q71RC1 249 aaPredicted RBP18.02■□□□□ 0.48
RRP9-201ENST00000232888 PRR25Q96S07 402 aa18.02■□□□□ 0.48
RRP9-201ENST00000232888 PPP1R14DQ9NXH3 145 aa18.02■□□□□ 0.48
RRP9-201ENST00000232888 SMIM27A0A1W2PRY6 76 aa18.01■□□□□ 0.47
RRP9-201ENST00000232888 P01737 135 aa18.01■□□□□ 0.47
RRP9-201ENST00000232888 ID1P41134 155 aa18.01■□□□□ 0.47
RRP9-201ENST00000232888 VGLL1Q99990 258 aa18.01■□□□□ 0.47
RRP9-201ENST00000232888 RPP21Q9H633 154 aaKnown RBP18.01■□□□□ 0.47
RRP9-201ENST00000232888 OVOL1O14753 267 aa18■□□□□ 0.47
RRP9-201ENST00000232888 C9orf47Q6ZRZ4 202 aa18■□□□□ 0.47
RRP9-201ENST00000232888 RNF114Q9Y508 228 aa18■□□□□ 0.47
RRP9-201ENST00000232888 PRAC2D3DTV9 90 aa18■□□□□ 0.47
RRP9-201ENST00000232888 NPIPB6E9PJ23 425 aa18■□□□□ 0.47
RRP9-201ENST00000232888 CD28P10747 220 aa18■□□□□ 0.47
RRP9-201ENST00000232888 SLURP1P55000 103 aa18■□□□□ 0.47
RRP9-201ENST00000232888 DEFB136Q30KP8 78 aa18■□□□□ 0.47
RRP9-201ENST00000232888 TSKUQ8WUA8 353 aa18■□□□□ 0.47
RRP9-201ENST00000232888 ZC2HC1AQ96GY0 325 aa18■□□□□ 0.47
RRP9-201ENST00000232888 A8MWL6 223 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms