RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LOXL1Q08397 574 aaPredicted RBP7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 C3orf36Q3SXR2 165 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 PDPNQ86YL7 162 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 RNF183Q96D59 192 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 ZNF479Q96JC4 524 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 VGLL1Q99990 258 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 ANAPC13Q9BS18 74 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 RPP21Q9H633 154 aaKnown RBP7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 EPDR1Q9UM22 224 aa7.48□□□□□ -1.21
HLA-DOA-201ENST00000229829 ABCA4P78363 2273 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 LOC107984156A0A0G2JMH3 177 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 TMEM178BH3BS89 294 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 H3BVH4 76 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 KLF5Q13887 457 aaPredicted RBP7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 ARL17AQ8IVW1 177 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 CIARTQ8N365 385 aaPredicted RBP7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 THAP8Q8NA92 274 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 A4D1N5 150 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 APOMO95445 188 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 WIPF2Q8TF74 440 aaPredicted RBP7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 SPTBN1Q01082 2364 aaKnown RBP7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 A0A0G2JNJ9 132 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 INS-IGF2F8WCM5 200 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 THBDP07204 575 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 SMIM17P0DL12 118 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 SMIM20Q8N5G0 67 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 NUP37Q8NFH4 326 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 GTSF1Q8WW33 167 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 Q9UFV3 132 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 CEP295Q9C0D2 2601 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 NBASA2RRP1 2371 aa7.47□□□□□ -1.21
HLA-DOA-201ENST00000229829 SMKR1H3BMG3 65 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 NDUFB3O43676 98 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 LTAP01374 205 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 LOXP28300 417 aaPredicted RBP7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 SUB1P53999 127 aaKnown RBP eCLIP7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 TMEM30BQ3MIR4 351 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 IGFL3Q6UXB1 125 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 GTSCR1Q86UQ5 136 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 ZNF747Q9BV97 191 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 PRORYQ9H606 182 aa7.46□□□□□ -1.21
HLA-DOA-201ENST00000229829 ARHGAP32A7KAX9 2087 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 HERV-K104P63124 156 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 GLMPQ8WWB7 406 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 DKK2Q9UBU2 259 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 TLN1Q9Y490 2541 aaKnown RBP7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 ARMS2P0C7Q2 107 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 UFC1Q9Y3C8 167 aa7.46□□□□□ -1.22
HLA-DOA-201ENST00000229829 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 C16orf97H3BN30 126 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 TNFRSF13BO14836 293 aaPredicted RBP7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 OR2J3O76001 311 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 DLX6P56179 175 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 RBPMS2Q6ZRY4 209 aaKnown RBP7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 FAM57AQ8TBR7 257 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 GPR82Q96P67 336 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 INSIG2Q9Y5U4 225 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 VMA21Q3ZAQ7 101 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
HLA-DOA-201ENST00000229829 LYNX1G3V0Z9 82 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 CRYGCP07315 174 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 IGHV1-8P0DP01 117 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 LYNX1P0DP58 116 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 RASL11AQ6T310 242 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 GOLT1AQ6ZVE7 132 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 OR4X2Q8NGF9 303 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 HIST1H4GQ99525 98 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 KLF12Q9Y4X4 402 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 GP9P14770 177 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 C3orf56Q8N813 242 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 IGFBPL1Q8WX77 278 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 Q9H3A6 140 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 TMEM160Q9NX00 188 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 EXOC3-AS1Q8N2X6 119 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 LINC00311Q8N616 119 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 PTH2Q96A98 100 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 PRSS22Q9GZN4 317 aa7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
HLA-DOA-201ENST00000229829 SPTA1P02549 2419 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 TRBV20-1A0A075B6N2 111 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 D6R8Y8 96 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 TCRAP04437 139 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 CLEC3BP05452 202 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 RPL27AP46776 148 aaKnown RBP7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 TMEM155Q4W5P6 130 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 SPTAN1Q13813 2472 aaKnown RBP7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 CRXO43186 299 aaPredicted RBP7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 SCGB1A1P11684 91 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 OR9G4Q8NGQ1 327 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 SMPXQ9UHP9 88 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 A0A1B0GUT8 65 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms