RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 DPM2O94777 84 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 TMEM167AQ8TBQ9 72 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 SPG11Q96JI7 2443 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 FNDC10F2Z333 226 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
PRDM4-201ENST00000228437 EMP1P54849 157 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 ANXA2RQ3ZCQ2 193 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 LYPD2Q6UXB3 125 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 RNF125Q96EQ8 232 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 VGLL1Q99990 258 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 F5H697 171 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 CEACAM3P40198 252 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 NCOR1P1Q9H4R4 102 aa11.61□□□□□ -0.55
PRDM4-201ENST00000228437 TMEM8BA6NDV4 472 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 HAX1O00165 279 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 NDUFS7O75251 213 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 DSPP15924 2871 aaKnown RBP11.6□□□□□ -0.55
PRDM4-201ENST00000228437 M0R381 172 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 BMI1P35226 326 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 PPP1R27Q86WC6 154 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 TNFRSF14Q92956 283 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 EXPH5Q8NEV8 1989 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 NCKAP5O14513 1909 aa11.6□□□□□ -0.55
PRDM4-201ENST00000228437 PSMB11A5LHX3 300 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 SPRY2O43597 315 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 LGALS7P47929 136 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 FAM104BQ5XKR9 115 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 SPINK8P0C7L1 97 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 CD300EQ496F6 205 aaPredicted RBP11.59□□□□□ -0.55
PRDM4-201ENST00000228437 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 GEMIN7Q9H840 131 aaKnown RBP11.59□□□□□ -0.55
PRDM4-201ENST00000228437 ZNF492Q9P255 531 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 C2CD3Q4AC94 2353 aa11.59□□□□□ -0.55
PRDM4-201ENST00000228437 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
PRDM4-201ENST00000228437 SYT8Q8NBV8 401 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 LGALS9BQ3B8N2 356 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 LGALS9CQ6DKI2 356 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 TRGV9Q99603 122 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
PRDM4-201ENST00000228437 ZNF71Q9NQZ8 489 aaPredicted RBP11.58□□□□□ -0.56
PRDM4-201ENST00000228437 SPAARA0A1B0GVQ0 90 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 TM4SF5O14894 197 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 ATRXP46100 2492 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 TRAV26-1A0A087WT03 109 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 EFNA4P52798 201 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 CT83Q5H943 113 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 MDS2Q8NDY4 140 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 MRPL35Q9NZE8 188 aaKnown RBP11.57□□□□□ -0.56
PRDM4-201ENST00000228437 RUSC1-AS1Q66K80 236 aa11.57□□□□□ -0.56
PRDM4-201ENST00000228437 PRTN3P24158 256 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 ERCC8Q13216 396 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 C1orf122Q6ZSJ8 110 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 RAXQ9Y2V3 346 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 TRBV25-1A0A075B6N4 114 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 IGKV1D-37A0A075B6S9 117 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 Q6AWC8 147 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 SLC25A15Q9Y619 301 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 PRSS47A8MTI9 375 aa11.56□□□□□ -0.56
PRDM4-201ENST00000228437 HOXA3O43365 443 aaPredicted RBP11.56□□□□□ -0.56
PRDM4-201ENST00000228437 IGKV2D-26A0A0A0MRZ7 120 aa11.55□□□□□ -0.56
PRDM4-201ENST00000228437 A0A1B0GW15 77 aa11.55□□□□□ -0.56
PRDM4-201ENST00000228437 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
PRDM4-201ENST00000228437 ANAPC13Q9BS18 74 aa11.55□□□□□ -0.56
PRDM4-201ENST00000228437 GP9P14770 177 aa11.54□□□□□ -0.56
PRDM4-201ENST00000228437 POU2AF1Q16633 256 aa11.54□□□□□ -0.56
PRDM4-201ENST00000228437 TRBV19A0A075B6N1 114 aa11.54□□□□□ -0.56
PRDM4-201ENST00000228437 C19orf71A6NCJ1 209 aa11.54□□□□□ -0.56
PRDM4-201ENST00000228437 CRXO43186 299 aaPredicted RBP11.54□□□□□ -0.56
PRDM4-201ENST00000228437 MFAP4P55083 255 aa11.54□□□□□ -0.56
PRDM4-201ENST00000228437 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
PRDM4-201ENST00000228437 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 PRRG2O14669 202 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 ATP5LO75964 103 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 TMEM170BQ5T4T1 132 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 C20orf78Q9BR46 151 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 AGRNO00468 2067 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 DSCAMO60469 2012 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 C10orf142B7Z368 130 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
PRDM4-201ENST00000228437 ZNF474Q6S9Z5 364 aaPredicted RBP11.52□□□□□ -0.56
PRDM4-201ENST00000228437 C1orf162Q8NEQ5 155 aaPredicted RBP11.52□□□□□ -0.56
PRDM4-201ENST00000228437 DEFB124Q8NES8 71 aa11.52□□□□□ -0.56
PRDM4-201ENST00000228437 PTH2Q96A98 100 aa11.52□□□□□ -0.56
PRDM4-201ENST00000228437 MLST8Q9BVC4 326 aa11.52□□□□□ -0.56
PRDM4-201ENST00000228437 PRSS22Q9GZN4 317 aa11.52□□□□□ -0.56
PRDM4-201ENST00000228437 LINC01549A6NIU2 74 aa11.52□□□□□ -0.56
PRDM4-201ENST00000228437 ARHGAP32A7KAX9 2087 aa11.52□□□□□ -0.57
PRDM4-201ENST00000228437 SORL1Q92673 2214 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms