RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 A0A1W2PS18 150 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 H3BUX3 64 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 HAX1O00165 279 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 IGKV2D-40P01614 121 aaPredicted RBP14.76□□□□□ -0.05
YBX3-201ENST00000228251 GATA3P23771 443 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 CSN1S1P47710 185 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 CAMPP49913 170 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 ATP5G2Q06055 141 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 C9orf152Q5JTZ5 239 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 C1orf194Q5T5A4 169 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 ZNF664Q8N3J9 261 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 GATD1Q8NB37 220 aa14.76□□□□□ -0.05
YBX3-201ENST00000228251 MAP1AP78559 2803 aaPredicted RBP14.76□□□□□ -0.05
YBX3-201ENST00000228251 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.75□□□□□ -0.05
YBX3-201ENST00000228251 LINC00527Q9UJ94 153 aa14.75□□□□□ -0.05
YBX3-201ENST00000228251 RNF114Q9Y508 228 aa14.75□□□□□ -0.05
YBX3-201ENST00000228251 HLA-DMBP28068 263 aa14.75□□□□□ -0.05
YBX3-201ENST00000228251 ANKRD17O75179 2603 aaKnown RBP14.74□□□□□ -0.05
YBX3-201ENST00000228251 RELQ04864 619 aaPredicted RBP14.74□□□□□ -0.05
YBX3-201ENST00000228251 LY6EQ16553 131 aa14.74□□□□□ -0.05
YBX3-201ENST00000228251 PSMG3-AS1Q96PY0 264 aa14.74□□□□□ -0.05
YBX3-201ENST00000228251 PRR25Q96S07 402 aa14.74□□□□□ -0.05
YBX3-201ENST00000228251 NAGKQ9UJ70 344 aa14.74□□□□□ -0.05
YBX3-201ENST00000228251 LRRK2Q5S007 2527 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 H3BUA1 57 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 M0QZK8 103 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 CD33P20138 364 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 PRO1933Q9H354 126 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 ZNF324O75467 553 aaPredicted RBP14.73□□□□□ -0.05
YBX3-201ENST00000228251 IGFL4Q6B9Z1 124 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 LCN12Q6JVE5 192 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 VGLL1Q99990 258 aa14.73□□□□□ -0.05
YBX3-201ENST00000228251 TSTD3H0UI37 97 aa14.72□□□□□ -0.05
YBX3-201ENST00000228251 TRGV3P03979 118 aa14.72□□□□□ -0.05
YBX3-201ENST00000228251 SAPCD1Q5SSQ6 148 aa14.72□□□□□ -0.05
YBX3-201ENST00000228251 NIT1Q86X76 327 aa14.72□□□□□ -0.05
YBX3-201ENST00000228251 SAMD10Q9BYL1 202 aa14.72□□□□□ -0.05
YBX3-201ENST00000228251 ZNF580Q9UK33 172 aa14.72□□□□□ -0.05
YBX3-201ENST00000228251 ZNF705FA8MVS1 300 aaPredicted RBP14.71□□□□□ -0.05
YBX3-201ENST00000228251 SH2D1AO60880 128 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 COX6B1P14854 86 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 Q6ZS46 218 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 Q8N976 141 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 URB1-AS1Q96HZ7 61 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 METTL26Q96S19 204 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 SLC50A1Q9BRV3 221 aa14.71□□□□□ -0.05
YBX3-201ENST00000228251 CSMD2Q7Z408 3487 aa14.71□□□□□ -0.06
YBX3-201ENST00000228251 TRAV8-2A0A0B4J237 113 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 SCGB1D1O95968 90 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 DDTP30046 118 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 BLCAPP62952 87 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 CFHR3Q02985 330 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 Q6AWC8 147 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 ZNF575Q86XF7 245 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 SIGLECL1Q8N7X8 197 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 LINC01356Q8N9X3 169 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 NRN1Q9NPD7 142 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 LOC102724200A0A096LPH7 203 aaPredicted RBP14.7□□□□□ -0.06
YBX3-201ENST00000228251 A0A1B0GUT8 65 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 RBAKDNA6NC62 111 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 PRAC2D3DTV9 90 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 IGLV1-40P01703 118 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 ARMS2P0C7Q2 107 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 CT45A10P0DMU9 189 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 TEX43Q6ZNM6 134 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 FAM208BQ5VWN6 2430 aa14.7□□□□□ -0.06
YBX3-201ENST00000228251 CR1P17927 2039 aa14.69□□□□□ -0.06
YBX3-201ENST00000228251 TRBV12-3P01733 135 aa14.69□□□□□ -0.06
YBX3-201ENST00000228251 AMTP48728 403 aa14.69□□□□□ -0.06
YBX3-201ENST00000228251 ZNF80P51504 273 aaPredicted RBP14.69□□□□□ -0.06
YBX3-201ENST00000228251 FAM162BQ5T6X4 162 aa14.69□□□□□ -0.06
YBX3-201ENST00000228251 Q8TAT8 98 aa14.69□□□□□ -0.06
YBX3-201ENST00000228251 MRPL53Q96EL3 112 aaKnown RBP14.69□□□□□ -0.06
YBX3-201ENST00000228251 USMG5Q96IX5 58 aa14.69□□□□□ -0.06
YBX3-201ENST00000228251 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.68□□□□□ -0.06
YBX3-201ENST00000228251 IGHV3-66A0A0C4DH42 116 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 KIR2DL5BA0A0G2JN68 375 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 KIR2DL5BA0A0G2JPC4 375 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 PRR31Q5SQ13 230 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 KIR2DL5AQ8N109 375 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 GLMPQ8WWB7 406 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 NDFIP1Q9BT67 221 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 A0A1B0GW15 77 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 J3QLI3 93 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 ARL3P36405 182 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 SRSF2Q01130 221 aaKnown RBP14.68□□□□□ -0.06
YBX3-201ENST00000228251 KLK15Q9H2R5 256 aa14.68□□□□□ -0.06
YBX3-201ENST00000228251 ZNF207O43670 478 aaKnown RBP14.67□□□□□ -0.06
YBX3-201ENST00000228251 PMCHP20382 165 aa14.67□□□□□ -0.06
YBX3-201ENST00000228251 RIGQ13278 110 aa14.67□□□□□ -0.06
YBX3-201ENST00000228251 RNF182Q8N6D2 247 aa14.67□□□□□ -0.06
YBX3-201ENST00000228251 CSPG4Q6UVK1 2322 aa14.67□□□□□ -0.06
YBX3-201ENST00000228251 IGHV3OR16-13A0A075B7E8 117 aa14.66□□□□□ -0.06
YBX3-201ENST00000228251 IGHV3-74A0A0B4J1X5 117 aa14.66□□□□□ -0.06
YBX3-201ENST00000228251 NDUFA4O00483 81 aa14.66□□□□□ -0.06
YBX3-201ENST00000228251 FSHBP01225 129 aa14.66□□□□□ -0.06
YBX3-201ENST00000228251 C8orf86Q6ZUL3 223 aa14.66□□□□□ -0.06
YBX3-201ENST00000228251 C14orf144Q96I85 54 aa14.66□□□□□ -0.06
YBX3-201ENST00000228251 USP9YO00507 2555 aaPredicted RBP14.66□□□□□ -0.06
YBX3-201ENST00000228251 TMEM189A5PLL7 270 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 359.2 ms