RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
SHPK-201ENST00000225519 TLN1Q9Y490 2541 aaKnown RBP11.28□□□□□ -0.6
SHPK-201ENST00000225519 SPG11Q96JI7 2443 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 NDUFS8O00217 210 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 IGLV2-23P01705 113 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.6
SHPK-201ENST00000225519 CCL17Q92583 94 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 TMEM160Q9NX00 188 aa11.27□□□□□ -0.6
SHPK-201ENST00000225519 CREBBPQ92793 2442 aa11.27□□□□□ -0.61
SHPK-201ENST00000225519 A0A1W2PNU3 283 aaPredicted RBP11.27□□□□□ -0.61
SHPK-201ENST00000225519 CNTFRP26992 372 aa11.27□□□□□ -0.61
SHPK-201ENST00000225519 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
SHPK-201ENST00000225519 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 H3BMG7 143 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 IL4P05112 153 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 GATA4P43694 442 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 CRIP1P50238 77 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 CKS1BP61024 79 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 TMEM14CQ9P0S9 112 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 SH2D1AO60880 128 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 IGKCP01834 107 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 SCGB1A1P11684 91 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 ZC2HC1BQ5TFG8 222 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 LINC00574Q9H8X3 128 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 ORM1P02763 201 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 EVI2AP22794 236 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 S4R3C0 116 aa11.26□□□□□ -0.61
SHPK-201ENST00000225519 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 IGHG3P01860 377 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 RAB9AP51151 201 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 SVIPQ8NHG7 77 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 TRBV25-1A0A075B6N4 114 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
SHPK-201ENST00000225519 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 F8W1H4 67 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 GAGE13Q4V321 117 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
SHPK-201ENST00000225519 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 DPM2O94777 84 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 CEND1Q8N111 149 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
SHPK-201ENST00000225519 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
SHPK-201ENST00000225519 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
SHPK-201ENST00000225519 SPANXB1Q9NS25 103 aaPredicted RBP11.23□□□□□ -0.61
SHPK-201ENST00000225519 TRAV17A0A0B4J275 112 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 IGLL5B9A064 214 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.22□□□□□ -0.61
SHPK-201ENST00000225519 DLX1P56177 255 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 PPP1R27Q86WC6 154 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 RNF125Q96EQ8 232 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 RAI1Q7Z5J4 1906 aaPredicted RBP11.22□□□□□ -0.61
SHPK-201ENST00000225519 Q8TAT8 98 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 SPAG8Q99932 426 aaPredicted RBP11.22□□□□□ -0.61
SHPK-201ENST00000225519 HIGD1BQ9P298 99 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 MALRD1Q5VYJ5 2156 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 KLF17Q5JT82 389 aaPredicted RBP11.22□□□□□ -0.61
SHPK-201ENST00000225519 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 AGRNO00468 2067 aa11.22□□□□□ -0.61
SHPK-201ENST00000225519 TRBV6-1A0A0K0K1D8 114 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 CEACAM3P40198 252 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 ODF1Q14990 250 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 CCDC144NLQ6NUI1 221 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 TMEM158Q8WZ71 300 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 DKK4Q9UBT3 224 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 U3KQK5 164 aa11.21□□□□□ -0.61
SHPK-201ENST00000225519 COX7A1P24310 79 aa11.21□□□□□ -0.62
SHPK-201ENST00000225519 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.62
SHPK-201ENST00000225519 ATP5G2Q06055 141 aa11.21□□□□□ -0.62
SHPK-201ENST00000225519 TEX36Q5VZQ5 186 aa11.21□□□□□ -0.62
SHPK-201ENST00000225519 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.62
SHPK-201ENST00000225519 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.62
SHPK-201ENST00000225519 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.62
SHPK-201ENST00000225519 LCNL1Q6ZST4 164 aa11.2□□□□□ -0.62
SHPK-201ENST00000225519 OVOL3O00110 214 aa11.2□□□□□ -0.62
SHPK-201ENST00000225519 HOXB4P17483 251 aaPredicted RBP11.2□□□□□ -0.62
SHPK-201ENST00000225519 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
SHPK-201ENST00000225519 NXT2Q9NPJ8 142 aaKnown RBP11.2□□□□□ -0.62
SHPK-201ENST00000225519 WI2-2373I1.2A0A1W2PRP0 233 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 H3BRN7 92 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms