RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 KNCNA6PVL3 124 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 NDUFB4O95168 129 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 SNAPINO95295 136 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 ARL14EPLP0DKL9 152 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 LINC00518Q8N0U6 118 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 SEC11CQ9BY50 192 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 AGRNO00468 2067 aa11.1□□□□□ -0.63
RPA3-201ENST00000223129 RBMY1BA6NDE4 496 aaKnown RBP11.1□□□□□ -0.63
RPA3-201ENST00000223129 RBMY1EA6NEQ0 496 aaKnown RBP11.1□□□□□ -0.63
RPA3-201ENST00000223129 ZNF705EA8MWA4 302 aaPredicted RBP11.1□□□□□ -0.63
RPA3-201ENST00000223129 RBMY1DP0C7P1 496 aaKnown RBP11.1□□□□□ -0.63
RPA3-201ENST00000223129 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
RPA3-201ENST00000223129 GUK1Q16774 197 aa11.1□□□□□ -0.63
RPA3-201ENST00000223129 SAMD13Q5VXD3 122 aa11.1□□□□□ -0.63
RPA3-201ENST00000223129 PQLC2Q6ZP29 291 aa11.1□□□□□ -0.63
RPA3-201ENST00000223129 TREM1Q9NP99 234 aa11.1□□□□□ -0.63
RPA3-201ENST00000223129 CTXND1A0A1B0GTU2 59 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 F6UB75 175 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 FRMD6-AS1P0C7T7 363 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 GDF5OSQ5U4N7 250 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 SLC50A1Q9BRV3 221 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 FGF8P55075 233 aaPredicted RBP11.09□□□□□ -0.63
RPA3-201ENST00000223129 EXOC3-AS1Q8N2X6 119 aa11.09□□□□□ -0.63
RPA3-201ENST00000223129 ZNF705FA8MVS1 300 aaPredicted RBP11.08□□□□□ -0.64
RPA3-201ENST00000223129 A8MZ25 164 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
RPA3-201ENST00000223129 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
RPA3-201ENST00000223129 PSG3Q16557 428 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 CXorf1O96002 111 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 GCHFRP30047 84 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 RANP62826 216 aaKnown RBP11.08□□□□□ -0.64
RPA3-201ENST00000223129 PDE6HQ13956 83 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 TMEM88Q6PEY1 159 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
RPA3-201ENST00000223129 SAV1Q9H4B6 383 aaPredicted RBP11.08□□□□□ -0.64
RPA3-201ENST00000223129 ZNF253O75346 499 aa11.07□□□□□ -0.64
RPA3-201ENST00000223129 ZNF705DP0CH99 300 aaPredicted RBP11.07□□□□□ -0.64
RPA3-201ENST00000223129 ZNF705BP0CI00 300 aaPredicted RBP11.07□□□□□ -0.64
RPA3-201ENST00000223129 LINC00322Q6ZN03 302 aaPredicted RBP11.07□□□□□ -0.64
RPA3-201ENST00000223129 MAP1LC3B2A6NCE7 125 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 M0R3E3 92 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 SULT1A2P50226 295 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 PSG9Q00887 426 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 ICAM4Q14773 271 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 CBLN2Q8IUK8 224 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 STHQ8IWL8 128 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 ASCL2Q99929 193 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 MAP1LC3BQ9GZQ8 125 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
RPA3-201ENST00000223129 A0A1B0GV50 99 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 SFT2D1Q8WV19 159 aa11.06□□□□□ -0.64
RPA3-201ENST00000223129 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
RPA3-201ENST00000223129 DPPA3Q6W0C5 159 aa11.05□□□□□ -0.64
RPA3-201ENST00000223129 FOXI2Q6ZQN5 318 aa11.05□□□□□ -0.64
RPA3-201ENST00000223129 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
RPA3-201ENST00000223129 Q9H3A6 140 aa11.05□□□□□ -0.64
RPA3-201ENST00000223129 AAMDCQ9H7C9 122 aa11.05□□□□□ -0.64
RPA3-201ENST00000223129 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
RPA3-201ENST00000223129 A0A0J9YX75 114 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 H3BMM0 161 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 EBLN2Q6P2I7 272 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 TRPT1Q86TN4 253 aaKnown RBP11.04□□□□□ -0.64
RPA3-201ENST00000223129 OR4B1Q8NGF8 309 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 BIN3Q9NQY0 253 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 RAB5CP51148 216 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 HAGHQ16775 308 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
RPA3-201ENST00000223129 PGPA6NDG6 321 aa11.02□□□□□ -0.64
RPA3-201ENST00000223129 SFTA3P0C7M3 94 aa11.02□□□□□ -0.64
RPA3-201ENST00000223129 CNN1P51911 297 aaKnown RBP11.02□□□□□ -0.64
RPA3-201ENST00000223129 HIST1H1AQ02539 215 aaPredicted RBP11.02□□□□□ -0.64
RPA3-201ENST00000223129 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.64
RPA3-201ENST00000223129 OR8A1Q8NGG7 326 aa11.02□□□□□ -0.64
RPA3-201ENST00000223129 UBE2G2P60604 165 aa11.02□□□□□ -0.65
RPA3-201ENST00000223129 LYPD6BQ8NI32 183 aa11.02□□□□□ -0.65
RPA3-201ENST00000223129 B9D2Q9BPU9 175 aa11.02□□□□□ -0.65
RPA3-201ENST00000223129 FXYD7P58549 80 aa11.01□□□□□ -0.65
RPA3-201ENST00000223129 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
RPA3-201ENST00000223129 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
RPA3-201ENST00000223129 YTHDF2Q9Y5A9 579 aaKnown RBP11.01□□□□□ -0.65
RPA3-201ENST00000223129 CCL20P78556 96 aa11.01□□□□□ -0.65
RPA3-201ENST00000223129 PEA15Q15121 130 aa11.01□□□□□ -0.65
RPA3-201ENST00000223129 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
RPA3-201ENST00000223129 SMCO4Q9NRQ5 59 aa11.01□□□□□ -0.65
RPA3-201ENST00000223129 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
RPA3-201ENST00000223129 AKR1D1P51857 326 aa11□□□□□ -0.65
RPA3-201ENST00000223129 APOC4P55056 127 aa11□□□□□ -0.65
RPA3-201ENST00000223129 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
RPA3-201ENST00000223129 ERCC8Q13216 396 aa11□□□□□ -0.65
RPA3-201ENST00000223129 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms