RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 MSMBP08118 114 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 DMRTC2Q8IXT2 367 aaPredicted RBP9.27□□□□□ -0.93
NOD1-201ENST00000222823 C14orf178Q8N769 122 aaPredicted RBP9.27□□□□□ -0.93
NOD1-201ENST00000222823 TRAV2A0A0B4J234 112 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 LINC01356Q8N9X3 169 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 MALP21145 153 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 PCP4P48539 62 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 Q86TA4 180 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 AMN1Q8IY45 258 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
NOD1-201ENST00000222823 NDUFB8O95169 186 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 FXYD7P58549 80 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 MRPL27Q9P0M9 148 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 CRIP3Q6Q6R5 217 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 OR2K2Q8NGT1 345 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 PLA2G2EQ9NZK7 142 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 ADARB2-AS1A8MUL3 147 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 VCYO14598 125 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 MMP23AO75900 390 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 SYNJ2BPP57105 145 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 ZNF833PQ6ZTB9 187 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 FGF23Q9GZV9 251 aaPredicted RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 FNDC4Q9H6D8 234 aaPredicted RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 A0A087WX48 190 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 IGHV3-73A0A0B4J1V6 119 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 C15orf65H3BRN8 121 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
NOD1-201ENST00000222823 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 SEC11AP67812 179 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 HSD52Q0P140 79 aa9.25□□□□□ -0.93
NOD1-201ENST00000222823 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 ZNF134P52741 427 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 TEX36Q5VZQ5 186 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 RUSC1-AS1Q66K80 236 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 LINC00311Q8N616 119 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 OR9G4Q8NGQ1 327 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 G3V318 75 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 PFN1P07737 140 aaKnown RBP9.24□□□□□ -0.93
NOD1-201ENST00000222823 ZNF415Q09FC8 603 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 PIP4P1Q86T03 277 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 FAM110DQ8TAY7 271 aaPredicted RBP9.24□□□□□ -0.93
NOD1-201ENST00000222823 SLC25A2Q9BXI2 301 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 ADAMTS9Q9P2N4 1935 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 HOXA3O43365 443 aaPredicted RBP9.24□□□□□ -0.93
NOD1-201ENST00000222823 ARMS2P0C7Q2 107 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 GATA3P23771 443 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
NOD1-201ENST00000222823 KLF2Q9Y5W3 355 aaPredicted RBP9.24□□□□□ -0.93
NOD1-201ENST00000222823 TECTAO75443 2155 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 SP5Q6BEB4 398 aaPredicted RBP9.23□□□□□ -0.93
NOD1-201ENST00000222823 IGHV1-69DA0A0B4J2H0 117 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 IGHV1-69P01742 117 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 ZNF479Q96JC4 524 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 UBE2E2Q96LR5 201 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 A6NNC1 897 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 SMKR1H3BMG3 65 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 ERCC8Q13216 396 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 GUSBP1Q15486 140 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
NOD1-201ENST00000222823 TSPAN13O95857 204 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 ZC2HC1BQ5TFG8 222 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 MAPK1IP1LQ8NDC0 245 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 TMEM158Q8WZ71 300 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 MEGF9Q9H1U4 602 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 NCOR2Q9Y618 2525 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 MYO9AB2RTY4 2548 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 hDV102S1A0JD36 115 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 CSTL1Q9H114 145 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 CEP192Q8TEP8 1941 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 DEFB131AP59861 70 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 PAX2Q02962 417 aa9.22□□□□□ -0.93
NOD1-201ENST00000222823 MORN3Q6PF18 240 aaPredicted RBP9.22□□□□□ -0.93
NOD1-201ENST00000222823 IGHV3-53P01767 116 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 IGHV2-5P01817 119 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 DTX2Q86UW9 622 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 LSM4Q9Y4Z0 139 aaKnown RBP9.21□□□□□ -0.93
NOD1-201ENST00000222823 C2CD3Q4AC94 2353 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 WDR87Q6ZQQ6 2873 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 SORL1Q92673 2214 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 HIVEP2P31629 2446 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 EML5Q05BV3 1969 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 TRBV19A0A075B6N1 114 aa9.21□□□□□ -0.93
NOD1-201ENST00000222823 IGHV2-70DA0A0C4DH43 119 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms