RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CDSNQ15517 529 aa12.07□□□□□ -0.48
TGFB1-201ENST00000221930 Q86TA4 180 aa12.07□□□□□ -0.48
TGFB1-201ENST00000221930 TMEM189A5PLL7 270 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 LY6LH3BQJ8 138 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 K7EIM0 57 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 KLRD1Q13241 179 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 GAGE12HA6NDE8 117 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 SLC25A34Q6PIV7 304 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 BCL6BQ8N143 479 aaPredicted RBP12.06□□□□□ -0.48
TGFB1-201ENST00000221930 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
TGFB1-201ENST00000221930 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
TGFB1-201ENST00000221930 OR8B3Q8NGG8 313 aa12.05□□□□□ -0.48
TGFB1-201ENST00000221930 OR8B2Q96RD0 313 aa12.05□□□□□ -0.48
TGFB1-201ENST00000221930 PIEZO1Q92508 2521 aa12.05□□□□□ -0.48
TGFB1-201ENST00000221930 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
TGFB1-201ENST00000221930 LIPFP07098 398 aa12.05□□□□□ -0.48
TGFB1-201ENST00000221930 HES1Q14469 280 aa12.05□□□□□ -0.48
TGFB1-201ENST00000221930 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
TGFB1-201ENST00000221930 C2orf70A6NJV1 201 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 IL4P05112 153 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 HTR1DP28221 377 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 ZNF138P52744 262 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 SEC11AP67812 179 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 ZNF492Q9P255 531 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 ZNF785A8K8V0 405 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 HIST1H1AQ02539 215 aaPredicted RBP12.04□□□□□ -0.48
TGFB1-201ENST00000221930 FAM110AQ9BQ89 295 aa12.04□□□□□ -0.48
TGFB1-201ENST00000221930 C9orf118A6NHY6 69 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 CT83Q5H943 113 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 AP1S3Q96PC3 154 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 TMEM14CQ9P0S9 112 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 TRBV19A0A075B6N1 114 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 M0R3E3 92 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 LINC00173Q6ZV60 143 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 ZNF491Q8N8L2 437 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 OR2K2Q8NGT1 345 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 PRORYQ9H606 182 aa12.03□□□□□ -0.48
TGFB1-201ENST00000221930 CHEK1O14757 476 aa12.02□□□□□ -0.48
TGFB1-201ENST00000221930 NBR2O15453 112 aa12.02□□□□□ -0.48
TGFB1-201ENST00000221930 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.48
TGFB1-201ENST00000221930 SHANK2-AS3Q9BTD1 123 aa12.02□□□□□ -0.48
TGFB1-201ENST00000221930 DPM3Q9P2X0 92 aa12.02□□□□□ -0.48
TGFB1-201ENST00000221930 H0Y8G0 127 aa12.02□□□□□ -0.49
TGFB1-201ENST00000221930 CCL21O00585 134 aa12.02□□□□□ -0.49
TGFB1-201ENST00000221930 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
TGFB1-201ENST00000221930 NPIPB6E9PJ23 425 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 TPPP3Q9BW30 176 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 TMEM8BA6NDV4 472 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 H3BRM9 83 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 SIGLEC15Q6ZMC9 328 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 LY6G5BQ8NDX9 201 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 CFHR4Q92496 578 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 RNF5Q99942 180 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 GFRA4Q9GZZ7 299 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 TSSC4Q9Y5U2 329 aaPredicted RBP12.01□□□□□ -0.49
TGFB1-201ENST00000221930 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 TEX48A0A1B0GUV7 120 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 FAM120AOSQ5T036 256 aa12.01□□□□□ -0.49
TGFB1-201ENST00000221930 TIMM8BQ9Y5J9 83 aaPredicted RBP12.01□□□□□ -0.49
TGFB1-201ENST00000221930 H3BRN7 92 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 CSN3P07498 182 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 C1RLQ9NZP8 487 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 ZNF207O43670 478 aaKnown RBP12□□□□□ -0.49
TGFB1-201ENST00000221930 APOHP02749 345 aaPredicted RBP12□□□□□ -0.49
TGFB1-201ENST00000221930 ARMS2P0C7Q2 107 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 HOXB4P17483 251 aaPredicted RBP12□□□□□ -0.49
TGFB1-201ENST00000221930 HERV-K104P63124 156 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 JMJD8Q96S16 334 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 TMEM70Q9BUB7 260 aa12□□□□□ -0.49
TGFB1-201ENST00000221930 MCRIP2Q9BUT9 160 aaKnown RBP12□□□□□ -0.49
TGFB1-201ENST00000221930 SOX21Q9Y651 276 aaPredicted RBP12□□□□□ -0.49
TGFB1-201ENST00000221930 FOXI2Q6ZQN5 318 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 NCBP2LA6PVI3 153 aaKnown RBP11.99□□□□□ -0.49
TGFB1-201ENST00000221930 J3QR89 54 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 OVOL3O00110 214 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 CRIP1P50238 77 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 RPL24P83731 157 aaKnown RBP11.99□□□□□ -0.49
TGFB1-201ENST00000221930 ADORA2A-AS1P86434 159 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 OR11H6Q8NGC7 330 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 PSG8Q9UQ74 426 aa11.99□□□□□ -0.49
TGFB1-201ENST00000221930 TRBV7-9A0A0J9YWB2 115 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 CLEC3BP05452 202 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 NDPQ00604 133 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 DYNAPQ8N1N2 210 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 ZNF414Q96IQ9 312 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
TGFB1-201ENST00000221930 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 GPR183P32249 361 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 DPF1Q92782 380 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 C8orf49Q96NF6 230 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
TGFB1-201ENST00000221930 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms