RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 ZNF705DP0CH99 300 aaPredicted RBP14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 ZNF705BP0CI00 300 aaPredicted RBP14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 FOXI2Q6ZQN5 318 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 CLEC5AQ9NY25 188 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 FBN3Q75N90 2809 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 A8MZ25 164 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 FRMD6-AS1P0C7T7 363 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 UBE2G2P60604 165 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 LYPD1Q8N2G4 141 aa14.36□□□□□ -0.11
SNAPC2-201ENST00000221573 A0A0J9YX75 114 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 HLA-DRB4P13762 266 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 RPL35AP18077 110 aaKnown RBP14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 CCL20P78556 96 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 STHQ8IWL8 128 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 ZNF680Q8NEM1 530 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 PRELID1Q9Y255 219 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 YTHDF2Q9Y5A9 579 aaKnown RBP14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 HLA-DRB4X5D2U9 266 aa14.35□□□□□ -0.11
SNAPC2-201ENST00000221573 TRAV1-1A0A0B4J248 108 aa14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 PGPA6NDG6 321 aa14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 H3BMM0 161 aa14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 EBLN2Q6P2I7 272 aa14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 TRPT1Q86TN4 253 aaKnown RBP14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 MRPL53Q96EL3 112 aaKnown RBP14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 OTORQ9NRC9 128 aa14.34□□□□□ -0.11
SNAPC2-201ENST00000221573 GGTLC3B5MD39 225 aa14.33□□□□□ -0.12
SNAPC2-201ENST00000221573 IGKV3-20P01619 116 aa14.33□□□□□ -0.12
SNAPC2-201ENST00000221573 LINC00322Q6ZN03 302 aaPredicted RBP14.33□□□□□ -0.12
SNAPC2-201ENST00000221573 OR8A1Q8NGG7 326 aa14.33□□□□□ -0.12
SNAPC2-201ENST00000221573 LOC102724200A0A096LPH7 203 aaPredicted RBP14.32□□□□□ -0.12
SNAPC2-201ENST00000221573 FAM74A7A6NL05 159 aa14.32□□□□□ -0.12
SNAPC2-201ENST00000221573 HIST1H1AQ02539 215 aaPredicted RBP14.32□□□□□ -0.12
SNAPC2-201ENST00000221573 OR4B1Q8NGF8 309 aa14.32□□□□□ -0.12
SNAPC2-201ENST00000221573 PRKDCP78527 4128 aaKnown RBP14.32□□□□□ -0.12
SNAPC2-201ENST00000221573 A0A1W2PRE2 83 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 IFNA7P01567 189 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 HBE1P02100 147 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 CNN1P51911 297 aaKnown RBP14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 SUMO1P63165 101 aaKnown RBP14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 BLOC1S1P78537 153 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 PCNPQ8WW12 178 aaKnown RBP14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 RPH3ALQ9UNE2 315 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 IGKV2-40A0A087WW87 121 aaPredicted RBP14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 TEX46H3BTG2 121 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 PAGE4O60829 102 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 IGKV2D-40P01614 121 aaPredicted RBP14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 SLC25A5P05141 298 aaKnown RBP14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 GNG5P63218 68 aa14.31□□□□□ -0.12
SNAPC2-201ENST00000221573 CMTM2Q8TAZ6 248 aa14.3□□□□□ -0.12
SNAPC2-201ENST00000221573 GNG13Q9P2W3 67 aa14.3□□□□□ -0.12
SNAPC2-201ENST00000221573 DIRC3C9JPN6 131 aa14.29□□□□□ -0.12
SNAPC2-201ENST00000221573 CSN1S1P47710 185 aa14.29□□□□□ -0.12
SNAPC2-201ENST00000221573 ATP5G3P48201 142 aa14.29□□□□□ -0.12
SNAPC2-201ENST00000221573 ERCC8Q13216 396 aa14.29□□□□□ -0.12
SNAPC2-201ENST00000221573 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
SNAPC2-201ENST00000221573 A8MTW9 85 aa14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 DUSP14O95147 198 aaKnown RBP14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 IFITM2Q01629 132 aa14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 CST9LP1Q5W188 147 aa14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 C5orf17Q8NAS9 161 aa14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 RXFP4Q8TDU9 374 aa14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 ARL2-SNX15V9GYD0 113 aa14.28□□□□□ -0.12
SNAPC2-201ENST00000221573 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 PPT1P50897 306 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 FXYD7P58549 80 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 HAGHQ16775 308 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 AMTNQ6UX39 209 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 SBSPONQ8IVN8 264 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 LYPD6BQ8NI32 183 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 VGLL1Q99990 258 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 SLC35B3Q9H1N7 401 aa14.27□□□□□ -0.12
SNAPC2-201ENST00000221573 GOLT1AQ6ZVE7 132 aa14.26□□□□□ -0.13
SNAPC2-201ENST00000221573 CLUHP3Q96NS8 147 aa14.26□□□□□ -0.13
SNAPC2-201ENST00000221573 ASCL2Q99929 193 aa14.26□□□□□ -0.13
SNAPC2-201ENST00000221573 MANBALQ9NQG1 85 aa14.26□□□□□ -0.13
SNAPC2-201ENST00000221573 TCRAP04437 139 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 GIG44P09565 113 aaPredicted RBP14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 APOC4P55056 127 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 CCDC28AQ8IWP9 274 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 NKX6-2Q9C056 277 aaPredicted RBP14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 AGPAT4-IT1Q9H0P7 198 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 CSTL1Q9H114 145 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 EPDR1Q9UM22 224 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 KIR2DL5BA0A0G2JN68 375 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 KIR2DL5BA0A0G2JPC4 375 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 CA1P00915 261 aaPredicted RBP14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 NMBP08949 121 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 MORN3Q6PF18 240 aaPredicted RBP14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 C9orf47Q6ZRZ4 202 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 KIR2DL5AQ8N109 375 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 ARL6IP6Q8N6S5 226 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 KIR2DL5BQ8NHK3 375 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 B9D2Q9BPU9 175 aa14.25□□□□□ -0.13
SNAPC2-201ENST00000221573 RBAKDNA6NC62 111 aa14.24□□□□□ -0.13
SNAPC2-201ENST00000221573 M0R2Z0 102 aa14.24□□□□□ -0.13
SNAPC2-201ENST00000221573 CT45A10P0DMU9 189 aa14.24□□□□□ -0.13
SNAPC2-201ENST00000221573 SPINK13Q1W4C9 94 aa14.24□□□□□ -0.13
SNAPC2-201ENST00000221573 Q8TAT8 98 aa14.24□□□□□ -0.13
SNAPC2-201ENST00000221573 TRAV8-1A0A0A6YYK1 113 aa14.23□□□□□ -0.13
SNAPC2-201ENST00000221573 C11orf94C9JXX5 98 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms