RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TFPI2P48307 235 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 EFNA4P52798 201 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 ERCC8Q13216 396 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 C2orf82Q6UX34 121 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 Q6ZVH6 145 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 V9GYV3 84 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 H3BTX0 84 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 SELLP14151 372 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 UBE2WQ96B02 151 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 CST9LQ9H4G1 147 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 CACNA1HO95180 2353 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 TRGV2A0A075B6R0 118 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 SPINK2P20155 84 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 RPL36AP83881 106 aaKnown RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 Q6ZSR3 168 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 RPL36ALQ969Q0 106 aaKnown RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 EIF4EBP3O60516 100 aaPredicted RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 CCL3L1P16619 93 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 RIPPLY3P57055 190 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 TMEM256Q8N2U0 113 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 MUC21A0A0G2JKD1 596 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 MUC21A0A140T8X8 626 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 EFNA2O43921 213 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 LTBRP36941 435 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 PMVKQ15126 192 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 C1orf122Q6ZSJ8 110 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 I3L3M4 83 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 PSPNO60542 156 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 LTAP01374 205 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 RNASE1P07998 156 aaKnown RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 RHOHQ15669 191 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 MPV17L2Q567V2 206 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 IGFL3Q6UXB1 125 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 C1orf147Q96MC9 270 aaPredicted RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 DSCAMO60469 2012 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 IGKV1D-17A0A075B6S4 117 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 TNFRSF6BO95407 300 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 IGLC2P0DOY2 106 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 IGLC3P0DOY3 106 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 GATA2P23769 480 aaPredicted RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 FAM27E3Q08E93 113 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 KRTAP27-1Q3LI81 207 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 FAM110DQ8TAY7 271 aaPredicted RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 IGFBPL1Q8WX77 278 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 A0A087WV48 116 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 PRSS47A8MTI9 375 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 CDKN1BP46527 198 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 SCRT1Q9BWW7 348 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 CEND1Q8N111 149 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 ITLN2Q8WWU7 325 aaPredicted RBP3.58□□□□□ -1.84
CHD9-201ENST00000219084 TMEM158Q8WZ71 300 aa3.58□□□□□ -1.84
CHD9-201ENST00000219084 TRBV19A0A075B6N1 114 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 A0A1W2PPM0 123 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 K7EM74 188 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 SPINK8P0C7L1 97 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 IL15RAQ13261 267 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 ADAMTSL5Q6ZMM2 481 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 EXOC3-AS1Q8N2X6 119 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 CSTL1Q9H114 145 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 C7orf69Q9H7B7 122 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 PRDM6Q9NQX0 595 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 TRAV13-2A0A0B4J235 113 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 HLA-DRB4P13762 266 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 ZNF493Q6ZR52 646 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 HAPLN4Q86UW8 402 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 KAAG1Q9UBP8 84 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 HLA-DRB4X5D2U9 266 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 TET2Q6N021 2002 aaPredicted RBP3.57□□□□□ -1.84
CHD9-201ENST00000219084 LILRA1O75019 489 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 EVI2AP22794 236 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 LY6EQ16553 131 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 ARTNQ5T4W7 220 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 PRR14LQ5THK1 2151 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 A0A087X0K7 114 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 H3BRN7 92 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 INS-IGF2F8WCM5 200 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 SNAI2O43623 268 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 PRTN3P24158 256 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 CD300EQ496F6 205 aaPredicted RBP3.57□□□□□ -1.84
CHD9-201ENST00000219084 ZNF672Q499Z4 452 aaPredicted RBP3.57□□□□□ -1.84
CHD9-201ENST00000219084 BMPERQ8N8U9 685 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 RCHY1Q96PM5 261 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
CHD9-201ENST00000219084 F8VRH5 84 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
CHD9-201ENST00000219084 FOXL2P58012 376 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 ABCA4P78363 2273 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 PTPRSQ13332 1948 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 TRBV6-1A0A0K0K1D8 114 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 IFITM1P13164 125 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 UBE2E1P51965 193 aa3.57□□□□□ -1.84
CHD9-201ENST00000219084 B4DSR2 109 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 J3QLI3 93 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 PAX9P55771 341 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 RPL32P62910 135 aaKnown RBP3.56□□□□□ -1.84
CHD9-201ENST00000219084 FGFBP3Q8TAT2 258 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms