RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 MANBALQ9NQG1 85 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 NOTCH1P46531 2555 aa9.77□□□□□ -0.84
TIMP1-201ENST00000218388 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
TIMP1-201ENST00000218388 PRB2P02812 416 aaPredicted RBP9.77□□□□□ -0.85
TIMP1-201ENST00000218388 HLA-DMBP28068 263 aa9.77□□□□□ -0.85
TIMP1-201ENST00000218388 UBE2G2P60604 165 aa9.77□□□□□ -0.85
TIMP1-201ENST00000218388 ACTL10Q5JWF8 245 aa9.77□□□□□ -0.85
TIMP1-201ENST00000218388 ZNF767PQ75MW2 155 aa9.77□□□□□ -0.85
TIMP1-201ENST00000218388 ARL6IP6Q8N6S5 226 aa9.77□□□□□ -0.85
TIMP1-201ENST00000218388 OR10J6PQ8NGY7 276 aa9.77□□□□□ -0.85
TIMP1-201ENST00000218388 SAV1Q9H4B6 383 aaPredicted RBP9.77□□□□□ -0.85
TIMP1-201ENST00000218388 NBEAL1Q6ZS30 2694 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 FAM74A7A6NL05 159 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 KNCNA6PVL3 124 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 A8MZ25 164 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 SLC25A5P05141 298 aaKnown RBP9.76□□□□□ -0.85
TIMP1-201ENST00000218388 IGHV4-30-4P0DP06 118 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 HLA-DRB4P13762 266 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 TAGLN2P37802 199 aaKnown RBP9.76□□□□□ -0.85
TIMP1-201ENST00000218388 RAB14P61106 215 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 C5orf17Q8NAS9 161 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 TCEAL7Q9BRU2 100 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 GNG13Q9P2W3 67 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 HLA-DRB4X5D2U9 266 aa9.76□□□□□ -0.85
TIMP1-201ENST00000218388 LOC102724200A0A096LPH7 203 aaPredicted RBP9.75□□□□□ -0.85
TIMP1-201ENST00000218388 A0A0J9YX75 114 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 ZNF705FA8MVS1 300 aaPredicted RBP9.75□□□□□ -0.85
TIMP1-201ENST00000218388 K7EIL1 84 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 K7EQM0 130 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 M0R3E3 92 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 PAGE4O60829 102 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 SUMO1P63165 101 aaKnown RBP9.75□□□□□ -0.85
TIMP1-201ENST00000218388 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
TIMP1-201ENST00000218388 ZNF124Q15973 351 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 MRAPQ8TCY5 172 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
TIMP1-201ENST00000218388 DNAH3Q8TD57 4116 aa9.75□□□□□ -0.85
TIMP1-201ENST00000218388 SERTM2A0A1B0GWG4 89 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 F6UB75 175 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 F6UZH7 168 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 H3BMM0 161 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 NUTF2P61970 127 aaKnown RBP9.74□□□□□ -0.85
TIMP1-201ENST00000218388 DEFA6Q01524 100 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 PMS2P11Q13670 270 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 DEFB121Q5J5C9 76 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 OR4B1Q8NGF8 309 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 LYPD6BQ8NI32 183 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 RPH3ALQ9UNE2 315 aa9.74□□□□□ -0.85
TIMP1-201ENST00000218388 RBAKDNA6NC62 111 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 DIRC3C9JPN6 131 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 CNN1P51911 297 aaKnown RBP9.73□□□□□ -0.85
TIMP1-201ENST00000218388 APOC4P55056 127 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 DEFB1P60022 68 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 CCL20P78556 96 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 GDF5OSQ5U4N7 250 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 MORN3Q6PF18 240 aaPredicted RBP9.73□□□□□ -0.85
TIMP1-201ENST00000218388 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
TIMP1-201ENST00000218388 HIST1H2BAQ96A08 127 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
TIMP1-201ENST00000218388 KIR2DL5BA0A0G2JN68 375 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 KIR2DL5BA0A0G2JPC4 375 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 C11orf94C9JXX5 98 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 PRAC2D3DTV9 90 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 TCRAP04437 139 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 NMBP08949 121 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 BCL2P10415 239 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 RPL35AP18077 110 aaKnown RBP9.72□□□□□ -0.85
TIMP1-201ENST00000218388 TMEM78Q5T7P6 136 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 KIR2DL5AQ8N109 375 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 KIR2DL5BQ8NHK3 375 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 LINC00477Q96M19 166 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 ATG101Q9BSB4 218 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 EPDR1Q9UM22 224 aa9.72□□□□□ -0.85
TIMP1-201ENST00000218388 IGKV2-40A0A087WW87 121 aaPredicted RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 RBMY1BA6NDE4 496 aaKnown RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 RBMY1EA6NEQ0 496 aaKnown RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 IGKV2D-40P01614 121 aaPredicted RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 RBMY1DP0C7P1 496 aaKnown RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 FRMD6-AS1P0C7T7 363 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 ZNF705DP0CH99 300 aaPredicted RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 ZNF705BP0CI00 300 aaPredicted RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 ATP5G3P48201 142 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 GNG5P63218 68 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 IFITM2Q01629 132 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
TIMP1-201ENST00000218388 C9orf47Q6ZRZ4 202 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 CYB561D1Q8N8Q1 229 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 VAX2Q9UIW0 290 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 AGRNO00468 2067 aa9.71□□□□□ -0.86
TIMP1-201ENST00000218388 A8MTW9 85 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 1718.7 ms