RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TCF24Q7RTU0 167 aa22.86■■□□□ 1.25
PABPN1-201ENST00000216727 COX8CQ7Z4L0 72 aa22.86■■□□□ 1.25
PABPN1-201ENST00000216727 TMEM256Q8N2U0 113 aa22.86■■□□□ 1.25
PABPN1-201ENST00000216727 C9orf139Q6ZV77 190 aa22.86■■□□□ 1.25
PABPN1-201ENST00000216727 TP53TG3Q9ULZ0 132 aa22.86■■□□□ 1.25
PABPN1-201ENST00000216727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.85■■□□□ 1.25
PABPN1-201ENST00000216727 OR5R1Q8NH85 324 aa22.85■■□□□ 1.25
PABPN1-201ENST00000216727 SLC50A1Q9BRV3 221 aa22.85■■□□□ 1.25
PABPN1-201ENST00000216727 A0A1B0GUS0 222 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 APCSP02743 223 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 APOHP02749 345 aaPredicted RBP22.84■■□□□ 1.25
PABPN1-201ENST00000216727 DNLZQ5SXM8 178 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 RBPMS2Q6ZRY4 209 aaKnown RBP22.84■■□□□ 1.25
PABPN1-201ENST00000216727 ABCA12Q86UK0 2595 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 CR1P17927 2039 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 NDUFA4O00483 81 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 PF4V1P10720 104 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 ESDP10768 282 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 PRSS57Q6UWY2 283 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 OR2D3Q8NGH3 330 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 KLK15Q9H2R5 256 aa22.84■■□□□ 1.25
PABPN1-201ENST00000216727 IGKV2-40A0A087WW87 121 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-201ENST00000216727 A0A0G2JLM5 398 aa22.83■■□□□ 1.25
PABPN1-201ENST00000216727 IGKV2D-40P01614 121 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-201ENST00000216727 FOXA3P55318 350 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-201ENST00000216727 SAPCD1Q5SSQ6 148 aa22.83■■□□□ 1.25
PABPN1-201ENST00000216727 CRIP1P50238 77 aa22.82■■□□□ 1.24
PABPN1-201ENST00000216727 GDF5OSQ5U4N7 250 aa22.82■■□□□ 1.24
PABPN1-201ENST00000216727 LCN12Q6JVE5 192 aa22.82■■□□□ 1.24
PABPN1-201ENST00000216727 IGHV3-66A0A0C4DH42 116 aa22.82■■□□□ 1.24
PABPN1-201ENST00000216727 CT45A10P0DMU9 189 aa22.82■■□□□ 1.24
PABPN1-201ENST00000216727 NUPR1O60356 82 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 TRBV12-3P01733 135 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 PRB4P10163 310 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-201ENST00000216727 OR10J3Q5JRS4 329 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 ASCL2Q99929 193 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 ZNF207O43670 478 aaKnown RBP22.81■■□□□ 1.24
PABPN1-201ENST00000216727 HLA-DMBP28068 263 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 HBBP68871 147 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 SLAQ13239 276 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 IGFL4Q6B9Z1 124 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 C8orf49Q96NF6 230 aa22.81■■□□□ 1.24
PABPN1-201ENST00000216727 KIAA1644Q3SXP7 199 aa22.8■■□□□ 1.24
PABPN1-201ENST00000216727 PRR25Q96S07 402 aa22.8■■□□□ 1.24
PABPN1-201ENST00000216727 IGHV3OR16-13A0A075B7E8 117 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 IGHV3-74A0A0B4J1X5 117 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 LINC00310P59036 64 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 PGLYRP4Q96LB8 373 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 Q96MF0 132 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 PRRC2AP48634 2157 aaKnown RBP22.79■■□□□ 1.24
PABPN1-201ENST00000216727 JOSD1Q15040 202 aaPredicted RBP22.79■■□□□ 1.24
PABPN1-201ENST00000216727 BAGE3Q86Y29 109 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 KRTAP1-3Q8IUG1 177 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 OR4X2Q8NGF9 303 aa22.79■■□□□ 1.24
PABPN1-201ENST00000216727 ZNF705FA8MVS1 300 aaPredicted RBP22.78■■□□□ 1.24
PABPN1-201ENST00000216727 ZANQ9Y493 2812 aa22.78■■□□□ 1.24
PABPN1-201ENST00000216727 IGHV3-49A0A0A0MS15 119 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 RBAKDNA6NC62 111 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 IGHV3-11P01762 117 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 SRIP30626 198 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 CAMPP49913 170 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 FAM209BQ5JX69 171 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 VGLL1Q99990 258 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 GSN-AS1Q9NRJ2 163 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 A8MWP6 167 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 SERF1AO75920 110 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 UNQ9165/PRO28630Q6UXU0 137 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 Q6YL49 198 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 GLMPQ8WWB7 406 aa22.77■■□□□ 1.24
PABPN1-201ENST00000216727 MRPL53Q96EL3 112 aaKnown RBP22.77■■□□□ 1.24
PABPN1-201ENST00000216727 VPREB3Q9UKI3 123 aa22.76■■□□□ 1.23
PABPN1-201ENST00000216727 GZMBP10144 247 aa22.75■■□□□ 1.23
PABPN1-201ENST00000216727 PAFAH1B2P68402 229 aa22.75■■□□□ 1.23
PABPN1-201ENST00000216727 FAM162BQ5T6X4 162 aa22.75■■□□□ 1.23
PABPN1-201ENST00000216727 C8orf86Q6ZUL3 223 aa22.75■■□□□ 1.23
PABPN1-201ENST00000216727 CREBBPQ92793 2442 aa22.75■■□□□ 1.23
PABPN1-201ENST00000216727 TRAV8-2A0A0B4J237 113 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 TMEM89A2RUT3 159 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 CDPF1Q6NVV7 123 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 CLEC5AQ9NY25 188 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 APCP25054 2843 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 F2Z2F3 143 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 HAX1O00165 279 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 PSMB8P28062 276 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 TMEM95Q3KNT9 176 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 Q6AWC8 147 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 CYB5R2Q6BCY4 276 aa22.74■■□□□ 1.23
PABPN1-201ENST00000216727 CHD6Q8TD26 2715 aa22.73■■□□□ 1.23
PABPN1-201ENST00000216727 LCNL1Q6ZST4 164 aa22.73■■□□□ 1.23
PABPN1-201ENST00000216727 RNF182Q8N6D2 247 aa22.73■■□□□ 1.23
PABPN1-201ENST00000216727 PRDM13Q9H4Q3 707 aa22.73■■□□□ 1.23
PABPN1-201ENST00000216727 NPFFR1Q9GZQ6 430 aa22.72■■□□□ 1.23
PABPN1-201ENST00000216727 PRAC2D3DTV9 90 aa22.72■■□□□ 1.23
PABPN1-201ENST00000216727 SH2D1AO60880 128 aa22.72■■□□□ 1.23
PABPN1-201ENST00000216727 Q8TAT8 98 aa22.72■■□□□ 1.23
PABPN1-201ENST00000216727 NDFIP1Q9BT67 221 aa22.72■■□□□ 1.23
PABPN1-201ENST00000216727 SSBP4Q9BWG4 385 aaPredicted RBP22.72■■□□□ 1.23
PABPN1-201ENST00000216727 A0A1W2PS18 150 aa22.7■■□□□ 1.22
PABPN1-201ENST00000216727 BMI1P35226 326 aa22.7■■□□□ 1.22
PABPN1-201ENST00000216727 KMT2BQ9UMN6 2715 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms