RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TRGV9Q99603 122 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 FNDC10F2Z333 226 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 K7EIM0 57 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 IGLV1-47P01700 117 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 NHLH1Q02575 133 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 TWIST1Q15672 202 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 Q6ZQT7 251 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 TTTY13Q9BZ97 58 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 IGHV2-70DA0A0C4DH43 119 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 SYS1-DBNDD2H3BUS1 97 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 TOMM40O96008 361 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 LY6DQ14210 128 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 MRPS16Q9Y3D3 137 aaKnown RBP11.88□□□□□ -0.51
EFNB1-201ENST00000204961 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 G3V318 75 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 GATA1P15976 413 aaPredicted RBP11.88□□□□□ -0.51
EFNB1-201ENST00000204961 CRIP1P50238 77 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 VGLL1Q99990 258 aa11.88□□□□□ -0.51
EFNB1-201ENST00000204961 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 CDKN1BP46527 198 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 RBPJQ06330 500 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 CHRDL1Q9BU40 450 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 C7orf69Q9H7B7 122 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 B9A039 149 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 I3L2K1 104 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 FMC1Q96HJ9 113 aa11.87□□□□□ -0.51
EFNB1-201ENST00000204961 LTAP01374 205 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 NBR2O15453 112 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 LIPFP07098 398 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 NMUP48645 174 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 SLC25A34Q6PIV7 304 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 MAP1LC3CQ9BXW4 147 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 UBTD1Q9HAC8 227 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 SAP30O75446 220 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 MYCNOSP40205 109 aa11.86□□□□□ -0.51
EFNB1-201ENST00000204961 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
EFNB1-201ENST00000204961 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 NAV2Q8IVL1 2488 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 TRBV19A0A075B6N1 114 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 TMEM189A5PLL7 270 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 OCIAD2Q56VL3 154 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 LCNL1Q6ZST4 164 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 OTORQ9NRC9 128 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 OR4A5Q8NH83 315 aa11.85□□□□□ -0.51
EFNB1-201ENST00000204961 K7EQM0 130 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 IGLV2-11P01706 119 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 PSG9Q00887 426 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 COX19Q49B96 90 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 KLK15Q9H2R5 256 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 CHODLQ9H9P2 273 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 CRYGCP07315 174 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 CSN1S1P47710 185 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 CACNG7P62955 275 aa11.84□□□□□ -0.51
EFNB1-201ENST00000204961 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 C1RLQ9NZP8 487 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 UFC1Q9Y3C8 167 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 C19orf71A6NCJ1 209 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 ZNF80P51504 273 aaPredicted RBP11.83□□□□□ -0.52
EFNB1-201ENST00000204961 TMEM191AQ9H0A3 160 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 MEGF9Q9H1U4 602 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 CLEC3BP05452 202 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 CKS2P33552 79 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 SIGLEC15Q6ZMC9 328 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 VMO1Q7Z5L0 202 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 TIMD4Q96H15 378 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
EFNB1-201ENST00000204961 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
EFNB1-201ENST00000204961 SOX21Q9Y651 276 aaPredicted RBP11.83□□□□□ -0.52
EFNB1-201ENST00000204961 CFAP46Q8IYW2 2715 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 TNFRSF13BO14836 293 aaPredicted RBP11.82□□□□□ -0.52
EFNB1-201ENST00000204961 SH2D1AO60880 128 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 ZFP36P26651 326 aaKnown RBP11.82□□□□□ -0.52
EFNB1-201ENST00000204961 ATP5IP56385 69 aaPredicted RBP11.82□□□□□ -0.52
EFNB1-201ENST00000204961 LINC00311Q8N616 119 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 GLMPQ8WWB7 406 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 SRD5A1P18405 259 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 BRD3OSQ6XYD6 125 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 ARPC1AQ92747 370 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 PRELID3AQ96N28 172 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
EFNB1-201ENST00000204961 TRAV26-2A0A0B4J265 109 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms