RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 HLA-DMBP28068 263 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 MEOX2P50222 304 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 RPL19P84098 196 aaKnown RBP14.23□□□□□ -0.13
CTSA-201ENST00000191018 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
CTSA-201ENST00000191018 PRB4P10163 310 aaPredicted RBP14.23□□□□□ -0.13
CTSA-201ENST00000191018 CDX1P47902 265 aaPredicted RBP14.23□□□□□ -0.13
CTSA-201ENST00000191018 KRTAP1-1Q07627 177 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 IGFL4Q6B9Z1 124 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 SIGLECL1Q8N7X8 197 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 ZC2HC1AQ96GY0 325 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 PEF1Q9UBV8 284 aaKnown RBP14.23□□□□□ -0.13
CTSA-201ENST00000191018 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
CTSA-201ENST00000191018 P01737 135 aa14.22□□□□□ -0.13
CTSA-201ENST00000191018 CBLN1P23435 193 aa14.22□□□□□ -0.13
CTSA-201ENST00000191018 IL17RELQ6ZVW7 336 aa14.22□□□□□ -0.13
CTSA-201ENST00000191018 GNB1LQ9BYB4 327 aa14.22□□□□□ -0.13
CTSA-201ENST00000191018 IGKV2-40A0A087WW87 121 aaPredicted RBP14.21□□□□□ -0.13
CTSA-201ENST00000191018 IGKV2D-40P01614 121 aaPredicted RBP14.21□□□□□ -0.13
CTSA-201ENST00000191018 COX19Q49B96 90 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.13
CTSA-201ENST00000191018 LCN12Q6JVE5 192 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 COX8CQ7Z4L0 72 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 Q8N2B8 174 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 GBGT1Q8N5D6 347 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 MYOZ3Q8TDC0 251 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 DAZAP1Q96EP5 407 aaKnown RBP14.21□□□□□ -0.13
CTSA-201ENST00000191018 NEU1Q99519 415 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 NAT8BQ9UHF3 227 aa14.21□□□□□ -0.13
CTSA-201ENST00000191018 IFITM10A6NMD0 228 aa14.21□□□□□ -0.14
CTSA-201ENST00000191018 SLC35B1P78383 322 aa14.21□□□□□ -0.14
CTSA-201ENST00000191018 NUP35Q8NFH5 326 aa14.21□□□□□ -0.14
CTSA-201ENST00000191018 TRAV8-2A0A0B4J237 113 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 ZNF705FA8MVS1 300 aaPredicted RBP14.2□□□□□ -0.14
CTSA-201ENST00000191018 A8MWL6 223 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 SPINK4O60575 86 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 ELANEP08246 267 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 FOXE3Q13461 319 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 C8orf86Q6ZUL3 223 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 LINC00518Q8N0U6 118 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 TMEM86BQ8N661 226 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 OR4B1Q8NGF8 309 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 ASCL2Q99929 193 aa14.2□□□□□ -0.14
CTSA-201ENST00000191018 ITPR2Q14571 2701 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 FLNAP21333 2647 aaKnown RBP14.19□□□□□ -0.14
CTSA-201ENST00000191018 UNC79Q9P2D8 2635 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 HIGD1CA8MV81 97 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 SNURFLB1AK76 121 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 CRIP1P50238 77 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 GFI1BQ5VTD9 330 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 WDR73Q6P4I2 378 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 HIST3H2BBQ8N257 126 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 MRPL53Q96EL3 112 aaKnown RBP14.19□□□□□ -0.14
CTSA-201ENST00000191018 GFRA4Q9GZZ7 299 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 MRPL18Q9H0U6 180 aaKnown RBP14.19□□□□□ -0.14
CTSA-201ENST00000191018 CCDC168Q8NDH2 2452 aa14.19□□□□□ -0.14
CTSA-201ENST00000191018 MT-ND6P03923 174 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 RPLP1P05386 114 aaKnown RBP14.18□□□□□ -0.14
CTSA-201ENST00000191018 MRPL54Q6P161 138 aaKnown RBP14.18□□□□□ -0.14
CTSA-201ENST00000191018 RASL11AQ6T310 242 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 TMEM136Q6ZRR5 245 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 RNF182Q8N6D2 247 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 RNF152Q8N8N0 203 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 WIPF2Q8TF74 440 aaPredicted RBP14.18□□□□□ -0.14
CTSA-201ENST00000191018 C8orf49Q96NF6 230 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 PRR25Q96S07 402 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 A0A1W2PS18 150 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 RBAKDNA6NC62 111 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 FAM231BA6NCW3 169 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 CD5LO43866 347 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 S100A8P05109 93 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 SAPCD1Q5SSQ6 148 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 GPHB5Q86YW7 130 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 VGLL1Q99990 258 aa14.18□□□□□ -0.14
CTSA-201ENST00000191018 GCN1Q92616 2671 aaKnown RBP14.18□□□□□ -0.14
CTSA-201ENST00000191018 XKRY2A2RUG3 117 aa14.17□□□□□ -0.14
CTSA-201ENST00000191018 PRAC2D3DTV9 90 aa14.17□□□□□ -0.14
CTSA-201ENST00000191018 K7EMT4 169 aa14.17□□□□□ -0.14
CTSA-201ENST00000191018 GTSF1Q8WW33 167 aa14.17□□□□□ -0.14
CTSA-201ENST00000191018 DUX5Q96PT3 197 aa14.17□□□□□ -0.14
CTSA-201ENST00000191018 DAZ1Q9NQZ3 744 aaKnown RBP14.17□□□□□ -0.14
CTSA-201ENST00000191018 IGHV7-4-1A0A0J9YVY3 117 aa14.16□□□□□ -0.14
CTSA-201ENST00000191018 CLEC5AQ9NY25 188 aa14.16□□□□□ -0.14
CTSA-201ENST00000191018 TCF24Q7RTU0 167 aa14.16□□□□□ -0.14
CTSA-201ENST00000191018 ATP5L2Q7Z4Y8 100 aa14.16□□□□□ -0.14
CTSA-201ENST00000191018 GPR61Q9BZJ8 451 aa14.16□□□□□ -0.14
CTSA-201ENST00000191018 HLA-DQA1P01909 254 aa14.15□□□□□ -0.14
CTSA-201ENST00000191018 CT45A10P0DMU9 189 aa14.15□□□□□ -0.14
CTSA-201ENST00000191018 FOXA3P55318 350 aaPredicted RBP14.15□□□□□ -0.14
CTSA-201ENST00000191018 FAM106AQ4KMX7 169 aa14.15□□□□□ -0.14
CTSA-201ENST00000191018 TM4SF20Q53R12 229 aa14.15□□□□□ -0.14
CTSA-201ENST00000191018 OR2D3Q8NGH3 330 aa14.15□□□□□ -0.14
CTSA-201ENST00000191018 TLN2Q9Y4G6 2542 aa14.15□□□□□ -0.14
CTSA-201ENST00000191018 A0A1B0GXF2 115 aa14.14□□□□□ -0.15
CTSA-201ENST00000191018 SOCS3O14543 225 aa14.14□□□□□ -0.15
CTSA-201ENST00000191018 LGALS1P09382 135 aaKnown RBP14.14□□□□□ -0.15
CTSA-201ENST00000191018 Q8TAT8 98 aa14.14□□□□□ -0.15
CTSA-201ENST00000191018 UBE2E2Q96LR5 201 aa14.14□□□□□ -0.15
CTSA-201ENST00000191018 SMPXQ9UHP9 88 aa14.14□□□□□ -0.15
CTSA-201ENST00000191018 RHPN1-AS1Q9BWJ2 59 aa14.14□□□□□ -0.15
CTSA-201ENST00000191018 AKAP9Q99996 3911 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 281.5 ms