RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 Q6ZS92 163 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 SH2D1AO60880 128 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 LOXL1Q08397 574 aaPredicted RBP13.6□□□□□ -0.23
PTPN18-201ENST00000175756 ZNF492Q9P255 531 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 A0A1B0GXF2 115 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 TAX1BP3O14907 124 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 HBDP02042 147 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 RPL7P18124 248 aaKnown RBP13.6□□□□□ -0.23
PTPN18-201ENST00000175756 FOXC2Q99958 501 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 MS4A6AQ9H2W1 248 aa13.6□□□□□ -0.23
PTPN18-201ENST00000175756 NBR2O15453 112 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 HLA-DMBP28068 263 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 LEPP41159 167 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 SPANXN1Q5VSR9 72 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 SPCS1Q9Y6A9 102 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 IGKV1-17P01599 117 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 ANKRD39Q53RE8 183 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 URB1-AS1Q96HZ7 61 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 RABAC1Q9UI14 185 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 NUP37Q8NFH4 326 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 ZNF747Q9BV97 191 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 SIGLEC8Q9NYZ4 499 aa13.59□□□□□ -0.23
PTPN18-201ENST00000175756 CD5LO43866 347 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 FABP2P12104 132 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 BMI1P35226 326 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 NEU4Q8WWR8 484 aaPredicted RBP13.58□□□□□ -0.24
PTPN18-201ENST00000175756 CT83Q5H943 113 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 COL25A1Q9BXS0 654 aaPredicted RBP13.58□□□□□ -0.24
PTPN18-201ENST00000175756 HAX1O00165 279 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 OR2K2Q8NGT1 345 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 KLF12Q9Y4X4 402 aa13.58□□□□□ -0.24
PTPN18-201ENST00000175756 RHOGP84095 191 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 KIR3DS1Q14943 382 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 TTTY13Q9BZ97 58 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 ERCC8Q13216 396 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 GTSCR1Q86UQ5 136 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 BCL6BQ8N143 479 aaPredicted RBP13.57□□□□□ -0.24
PTPN18-201ENST00000175756 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 TACC2O95359 2948 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 LOC105371242A0A075B767 164 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 K7EMI3 77 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 SFTA2Q6UW10 78 aa13.57□□□□□ -0.24
PTPN18-201ENST00000175756 SORL1Q92673 2214 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 A0A0G2JLM5 398 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 B9A039 149 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 KALRNO60229 2985 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 IGFL2Q6UWQ7 119 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 DEFB125Q8N687 156 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 PRO3102Q9H379 93 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 NHP2Q9NX24 153 aaKnown RBP13.56□□□□□ -0.24
PTPN18-201ENST00000175756 C19orf71A6NCJ1 209 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 SAP30O75446 220 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 PCP2Q8IVA1 136 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 RAB1BQ9H0U4 201 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 MSRB1Q9NZV6 116 aa13.56□□□□□ -0.24
PTPN18-201ENST00000175756 COX8AP10176 69 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 MYOZ3Q8TDC0 251 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 PRSS22Q9GZN4 317 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 DKK2Q9UBU2 259 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 IGHV3OR16-10A0A075B7F0 116 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 CCL21O00585 134 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 NPYP01303 97 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 PVRIGQ6DKI7 326 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 ZNF491Q8N8L2 437 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 LINC00527Q9UJ94 153 aa13.55□□□□□ -0.24
PTPN18-201ENST00000175756 MRPL51Q4U2R6 128 aaKnown RBP13.54□□□□□ -0.24
PTPN18-201ENST00000175756 RNF182Q8N6D2 247 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 SMIM12Q96EX1 92 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 SCRT2Q9NQ03 307 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 ATMQ13315 3056 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 THBDP07204 575 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 ZNF672Q499Z4 452 aaPredicted RBP13.54□□□□□ -0.24
PTPN18-201ENST00000175756 Q6AWC8 147 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 PTPN13Q12923 2485 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 RBX1P62877 108 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 VGLL1Q99990 258 aa13.54□□□□□ -0.24
PTPN18-201ENST00000175756 NDUFA3O95167 84 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 MGPP08493 103 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 FAM104BQ5XKR9 115 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 DMXL1Q9Y485 3027 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 SMIM13P0DJ93 91 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 SEC11AP67812 179 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 LINC00311Q8N616 119 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
PTPN18-201ENST00000175756 TMEM78Q5T7P6 136 aa13.53□□□□□ -0.24
PTPN18-201ENST00000175756 CLEC19AQ6UXS0 136 aa13.52□□□□□ -0.24
PTPN18-201ENST00000175756 PTPRBP23467 1997 aa13.52□□□□□ -0.24
PTPN18-201ENST00000175756 M0R381 172 aa13.52□□□□□ -0.25
PTPN18-201ENST00000175756 MTURNQ8N3F0 131 aa13.52□□□□□ -0.25
PTPN18-201ENST00000175756 GOSR1O95249 250 aa13.52□□□□□ -0.25
PTPN18-201ENST00000175756 MYCNOSP40205 109 aa13.52□□□□□ -0.25
PTPN18-201ENST00000175756 SIGLEC15Q6ZMC9 328 aa13.52□□□□□ -0.25
PTPN18-201ENST00000175756 HIST1H4GQ99525 98 aa13.52□□□□□ -0.25
PTPN18-201ENST00000175756 A0A1B0GW15 77 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 FABP5P3A8MUU1 101 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms