RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm20830J3KML6 227 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Pla2g5P97391 137 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 ClcP97400 68 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Tnfsf18Q7TS55 173 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr1271Q8VG62 305 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Glrx2Q923X4 156 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Nubp1Q9R060 320 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 PtprdQ64487 1912 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Urb1Q571H0 2274 aaKnown RBP11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Ccl3P10855 92 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Cln5Q3UMW8 341 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Trat1Q3UU67 187 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr1437Q7TQR7 312 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Rspo4Q8BJ73 228 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr1408Q8VG32 310 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr508Q8VG42 310 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Mien1Q9CQ86 115 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Plxnd1Q3UH93 1925 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm21789J3QMZ1 123 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm21870J3QPN2 123 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm21883J3QPV3 123 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 MidnQ3TPJ7 465 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 LgalslbQ7TPX9 165 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr875Q7TRE5 310 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Acsm5Q8BGA8 578 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 TctaQ8VEA7 122 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Mrpl42Q9CPV3 142 aa11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Mbnl1Q9JKP5 341 aaKnown RBP11.79□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr1098A2AVB0 315 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr92L7N475 312 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 DdtO35215 118 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Foxa3P35584 353 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Q6DIA7 600 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr1392Q8VFA6 311 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Mrpl20Q9CQL4 149 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Vmn1r50Q9EP51 310 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Heatr5bQ8C547 2070 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Kif26bQ7TNC6 2112 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Vma21-psA0A140T8R2 101 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 H2-M5A7VMS3 348 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Efnb1P52795 345 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Xaf1Q5NBU8 273 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Il31Q6EAL8 163 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Nup35Q8R4R6 325 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Q9CR34 168 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr954Q9EQB6 314 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm20773A0A0A6YXW2 232 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm20807A0A0A6YXX7 232 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Zfp108E9Q8I5 642 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm20873J3QMQ9 232 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm20795J3QP49 232 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm21310J3QQ23 232 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Zfp36P22893 319 aaKnown RBP11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Gm21440Q3TTD8 232 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Srsf6Q3TWW8 339 aaKnown RBP11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 BC147527Q3V185 167 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Sdr39u1Q5M8N4 308 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Olfr1383Q7TQT2 311 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 6030452D12RikQ8CD33 222 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Cela3bQ9CQ52 269 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Prss32E9Q409 334 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 CrygsO35486 178 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Adcyap1O70176 175 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Efna2P52801 209 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Sult1a1P52840 291 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 AdoQ6PDY2 256 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 MetrnQ8C1Q4 291 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Pcgf1Q8R023 259 aaKnown RBP11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Tspo2Q9CRZ8 162 aa11.78□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 A930017K11RikE0CXQ2 571 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Cd5P13379 494 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Mesp1P97309 243 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Ccsmst1Q6RUT7 136 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Dirc2Q8BFQ6 478 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Bricd5Q8BV89 174 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 D1Ertd622eQ8VEB3 207 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Pnrc2Q9CR73 140 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Sdf2l1Q9ESP1 221 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Cldn10Q9Z0S6 231 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Unc119Q9Z2R6 240 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 AcacaQ5SWU9 2345 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Plxnb3Q9QY40 1902 aa11.77□□□□□ -0.52
Pcdha1-202ENSMUST00000193839 Trav17A0A075B655 113 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Gm28845A0A087WR76 214 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Irf2bp2E9Q1P8 570 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 B2mP01887 119 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Id4P41139 161 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr1330Q8VEY6 315 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr195Q8VGQ6 308 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Sft2d3Q9CSV6 209 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 ManfQ9CXI5 179 aaKnown RBP11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Plxna2P70207 1894 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Trav12-1A0N8R1 115 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Nat8f4G5E8L3 226 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr94Q6UAH0 386 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Znf250Q7TNU6 535 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Dppa1Q810Y7 116 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Fam219aQ9D772 157 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Q9DAZ5 108 aa11.77□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Zfp433A0A0J9YUD4 600 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms