RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ppp1r3cQ7TMB3 317 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 E130116L18RikQ8BMV6 101 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Smco3Q8BQM7 225 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Uqcr10Q8R1I1 64 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 RhovQ8VDU1 236 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr512Q8VFZ4 326 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1257Q8VGP0 309 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Epdr1Q99M71 224 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gdf15Q9Z0J7 303 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ighv1-7A0A075B5T7 117 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm28778A0A087WSK7 233 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr555E9Q547 315 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1220F7BL62 311 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm10269G3UWD7 123 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r60G3UY47 300 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm21882J3QN86 361 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm8265K7N6Y8 158 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gfi1bO70237 330 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ren2P00796 401 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Prrx1P63013 245 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Mindy2Q6PDI6 601 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Neil2Q6R2P8 329 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr688Q6W049 321 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hif1anQ8BLR9 349 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Znf146Q8BQN6 292 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 A730015C16RikQ8C992 119 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 MpiQ924M7 423 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Arpc5Q9CPW4 151 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nol3Q9D1X0 220 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 SelenofQ9ERR7 162 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hsf4Q9R0L1 492 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Dido1Q8C9B9 2256 aaKnown RBP7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr685A0A1L1SVG7 331 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm16368A0A1Y7VNG9 144 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Slc35d1A2AKQ0 355 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hbb-yP02104 147 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Taar4Q5QD15 347 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Slc35e3Q6PGC7 313 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fam212bQ80VY2 300 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 IdnkQ8R0J8 184 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r230Q8R2A2 316 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Dusp18Q8VE01 188 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1155Q8VFR3 314 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 GrhprQ91Z53 328 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Zfp958Q99LG7 467 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr661Q99NH4 319 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nat8Q9JIY7 227 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Myoz1Q9JK37 296 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 LystP97412 3788 aa7.08□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm21095A0A087WR14 222 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1289A0A288CFY5 326 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 4931422A03RikA2BHN9 113 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r5B2RQT2 315 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tmem139E9PX92 214 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr419E9Q0Y7 313 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr920E9Q413 310 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 F2rl2O08675 369 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 CntfrO88507 372 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 P06335 190 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ube2kP61087 200 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Rbp4Q00724 201 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 MyocosQ3UWS6 143 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ms4a13Q5FWC3 203 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Stoml3Q6PE84 287 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tmem106cQ80VP8 260 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nars2Q8BGV0 477 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Aqp6Q8C4A0 293 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ms4a6dQ99N07 247 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Lipt2Q9D009 231 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Znf22Q9ERU3 237 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ccl28Q9JIL2 130 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Psmb3Q9R1P1 205 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ighv5-12-4A0A0A6YWG4 117 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Cdc34bA0A140T8I4 237 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Rpl23a-ps3A0A140T8M7 156 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm37797A0A1D5RLC8 261 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Zdhhc22A0PK84 263 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm3633L7N233 213 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm9611L7N476 213 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fgfbp1O70514 251 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Sdc1P18828 311 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Meox2P32443 303 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Cd27P41272 250 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Rpl23aP62751 156 aaKnown RBP7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Npy1rQ04573 382 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm1673Q3UR78 90 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nhlh2Q64221 135 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Poc1bQ8BHD1 476 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fbxw26Q8BI58 466 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 TskuQ8CBR6 354 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Cd300eQ8K249 196 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 KantrA0A1W2P7I0 76 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr204E9Q8M0 305 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Klrd1O54707 179 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ca5aP23589 299 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gcm1P70348 436 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 ApohQ01339 345 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 YrdcQ3U5F4 280 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Calm5Q6W3E0 140 aa7.07□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vma21Q78T54 101 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms