RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 MmdQ9CQY7 238 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Vmn1r167G3UW71 315 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 A630023A22RikJ3QP60 199 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Jsrp1Q3MI48 332 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Vstm2aQ8R0A6 236 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Olfr1404Q8VGE1 313 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Olfr577Q8VH11 312 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Sf3b5Q923D4 86 aaKnown RBP9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Ms4a6cQ99N08 217 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Nubp1Q9R060 320 aa9.59□□□□□ -0.87
Topbp1-201ENSMUST00000035164 DdtO35215 118 aa9.59□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Iglc3P01845 104 aa9.59□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Mc5rP41149 325 aa9.59□□□□□ -0.88
Topbp1-201ENSMUST00000035164 TslpQ9JIE6 140 aa9.59□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Tmem139E9PX92 214 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Zfp58P16372 489 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Hsf5Q5ND04 624 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Vdac2Q60930 295 aaKnown RBP9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr93Q6UAH1 312 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Hnrnpa3Q8BG05 379 aaKnown RBP9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Sfxn3Q91V61 321 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gar1Q9CY66 231 aaKnown RBP9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Rnd2Q9QYM5 227 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ighv5-2A0A0A6YVX8 117 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Fam170bE9PXT9 378 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm28305F6U473 122 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Syngr2O55101 224 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Sc5dO88822 299 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Rpl31P62900 125 aaKnown RBP9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Rbp4Q00724 201 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Tspan7Q62283 249 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Onecut2Q6XBJ3 505 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Zfp729bQ80VN4 1045 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Hapln4Q80WM4 400 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Psg22Q810J1 475 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Msrb3Q8BU85 253 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 PaxxQ8K0Y7 205 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1228Q8VGM9 323 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 EpcamQ99JW5 315 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1245A0A1L1SQJ6 307 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 RanP62827 216 aaKnown RBP9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Sfrp2P97299 295 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Lhfpl2Q8BGA2 222 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Vkorc1Q9CRC0 161 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Dctn5Q9QZB9 182 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Adam11Q9R1V4 773 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 FryE9Q8I9 3020 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ighv1-42A0A0A6YY38 117 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Fcgr4A0A0B4J1G0 249 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Trbv12-1A0A0B4J1H0 124 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Igkv12-89A0A0G2JGW8 112 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm20878L7N244 103 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 P01915 264 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm5868Q8BJG1 145 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Slc36a4Q8CH36 500 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Rab11fip5Q8R361 645 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Sco2Q8VCL2 255 aa9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Nhp2Q9CRB2 153 aaKnown RBP9.58□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Tpsb2P21845 276 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Prss44Q402U7 372 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 PtafrQ62035 341 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm5148Q8BGG2 154 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1392Q8VFA6 311 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Mien1Q9CQ86 115 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Bcl2l10Q9Z0F3 191 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Aifm1Q9Z0X1 612 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Chd7A2AJK6 2986 aaKnown RBP9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ighv1-47A0A0A6YY41 117 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr493Q8VEW5 314 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr355Q8VFP6 310 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm10306Q9CUK2 115 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ssbp3Q9D032 388 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr753-ps1A0A140LHN3 164 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm20219A0A1B0GRQ3 87 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Zfp114B2RRA8 586 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ccl5P30882 91 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 G6pcP35576 357 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Sap30lQ5SQF8 182 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1356Q7TQU8 320 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Q8BG31 207 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Lax1Q8BHB3 407 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Fam214bQ8BR27 538 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Psg16Q8K0U8 395 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 StradbQ8K4T3 418 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gtf3aQ8VHT7 364 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Lamp5Q9D387 280 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gm14214V9GX35 225 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Alox12bO70582 701 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 PtcraP0C6B2 199 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Rab7aP51150 207 aaKnown RBP9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Aadacl4Q8BM81 407 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Uqcc3Q8K2T4 89 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr492Q8VFD1 314 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr482Q8VG03 323 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 HeylQ9DBX7 326 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Prss8Q9ESD1 342 aa9.57□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Trav6d-5A0A075B6B9 112 aa9.56□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Lrrc29A0A1B0GQY9 621 aa9.56□□□□□ -0.88
Topbp1-201ENSMUST00000035164 1700025C18RikA2A580 89 aa9.56□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Scgb1b3J3QJY4 93 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms