RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PSMB3P49720 205 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 UBE2G2P60604 165 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 C9orf66Q5T8R8 295 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 TMEM61Q8N0U2 210 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 NRN1Q9NPD7 142 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 GNG13Q9P2W3 67 aa13.18□□□□□ -0.3
PHGDH-230ENST00000641927 IGLL1P15814 213 aa13.17□□□□□ -0.3
PHGDH-230ENST00000641927 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
PHGDH-230ENST00000641927 GUK1Q16774 197 aa13.17□□□□□ -0.3
PHGDH-230ENST00000641927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.17□□□□□ -0.3
PHGDH-230ENST00000641927 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
PHGDH-230ENST00000641927 TRBV19A0A075B6N1 114 aa13.16□□□□□ -0.3
PHGDH-230ENST00000641927 A0A087X0K7 114 aa13.16□□□□□ -0.3
PHGDH-230ENST00000641927 IGLV1-51P01701 117 aa13.16□□□□□ -0.3
PHGDH-230ENST00000641927 RANP62826 216 aaKnown RBP13.16□□□□□ -0.3
PHGDH-230ENST00000641927 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
PHGDH-230ENST00000641927 LYPD6BQ8NI32 183 aa13.16□□□□□ -0.3
PHGDH-230ENST00000641927 MED9Q9NWA0 146 aa13.16□□□□□ -0.3
PHGDH-230ENST00000641927 MEOX2P50222 304 aa13.15□□□□□ -0.3
PHGDH-230ENST00000641927 INSL3P51460 131 aa13.15□□□□□ -0.3
PHGDH-230ENST00000641927 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
PHGDH-230ENST00000641927 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
PHGDH-230ENST00000641927 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.31
PHGDH-230ENST00000641927 SLC17A3O00476 420 aa13.15□□□□□ -0.31
PHGDH-230ENST00000641927 PPT1P50897 306 aa13.15□□□□□ -0.31
PHGDH-230ENST00000641927 HAGHQ16775 308 aa13.15□□□□□ -0.31
PHGDH-230ENST00000641927 TSPAN4O14817 238 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 PAGE4O60829 102 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 IFNA1P01562 189 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 PDE6HQ13956 83 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 PRR31Q5SQ13 230 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 CST9LP1Q5W188 147 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 IGFL4Q6B9Z1 124 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 SUN5Q8TC36 379 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
PHGDH-230ENST00000641927 TRAV25A0A0B4J276 109 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 NDUFB4O95168 129 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 PSG9Q00887 426 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 COMMD7Q86VX2 200 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 AAMDCQ9H7C9 122 aa13.13□□□□□ -0.31
PHGDH-230ENST00000641927 YTHDF2Q9Y5A9 579 aaKnown RBP13.13□□□□□ -0.31
PHGDH-230ENST00000641927 OR2K2Q8NGT1 345 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 SPAG8Q99932 426 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-230ENST00000641927 Q9H3A6 140 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-230ENST00000641927 FAM74A7A6NL05 159 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 ICAM4Q14773 271 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 LINC00052Q96N35 136 aa13.12□□□□□ -0.31
PHGDH-230ENST00000641927 EIF5A2Q9GZV4 153 aaKnown RBP13.12□□□□□ -0.31
PHGDH-230ENST00000641927 A0A1W2PRE2 83 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 PGPA6NDG6 321 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 ZNF253O75346 499 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 BCL2P10415 239 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 ID1P41134 155 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 SUMO1P63165 101 aaKnown RBP13.11□□□□□ -0.31
PHGDH-230ENST00000641927 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
PHGDH-230ENST00000641927 TRAV8-2A0A0B4J237 113 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 K7EQG2 157 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 ISLRO14498 428 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 SOCS3O14543 225 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 TOR2AQ5JU69 321 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 FAM24BQ8N5W8 94 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 CITED4Q96RK1 184 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 RARRES2Q99969 163 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 GPR61Q9BZJ8 451 aa13.1□□□□□ -0.31
PHGDH-230ENST00000641927 RBFOX3A6NFN3 312 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 PRB4P10163 310 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-230ENST00000641927 ATP5G3P48201 142 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
PHGDH-230ENST00000641927 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 OTORQ9NRC9 128 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 RPH3ALQ9UNE2 315 aa13.09□□□□□ -0.31
PHGDH-230ENST00000641927 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.31
PHGDH-230ENST00000641927 SLC25A5P05141 298 aaKnown RBP13.08□□□□□ -0.31
PHGDH-230ENST00000641927 PMS2P11Q13670 270 aa13.08□□□□□ -0.31
PHGDH-230ENST00000641927 PSMG4Q5JS54 123 aa13.08□□□□□ -0.31
PHGDH-230ENST00000641927 RXFP4Q8TDU9 374 aa13.08□□□□□ -0.31
PHGDH-230ENST00000641927 VAX2Q9UIW0 290 aa13.08□□□□□ -0.31
PHGDH-230ENST00000641927 ARL2-SNX15V9GYD0 113 aa13.08□□□□□ -0.31
PHGDH-230ENST00000641927 NOTCH3Q9UM47 2321 aa13.08□□□□□ -0.32
PHGDH-230ENST00000641927 LOC102723971A0A1B0GUV8 181 aa13.08□□□□□ -0.32
PHGDH-230ENST00000641927 M0R3E3 92 aa13.08□□□□□ -0.32
PHGDH-230ENST00000641927 S100A1P23297 94 aa13.08□□□□□ -0.32
PHGDH-230ENST00000641927 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.32
PHGDH-230ENST00000641927 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
PHGDH-230ENST00000641927 C20orf173Q96LM9 149 aa13.08□□□□□ -0.32
PHGDH-230ENST00000641927 NKX6-2Q9C056 277 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms