RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 NMBP08949 121 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 IGLL1P15814 213 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 GALR1P47211 349 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 MEOX2P50222 304 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 PDE6HQ13956 83 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 GUK1Q16774 197 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-225ENST00000640900 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 LRRC20Q8TCA0 184 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 SPAG8Q99932 426 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-225ENST00000640900 GPR61Q9BZJ8 451 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 OR51M1Q9H341 326 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 TRBV19A0A075B6N1 114 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 TRAV8-2A0A0B4J237 113 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 ARL14EPLP0DKL9 152 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 PYYP10082 97 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-225ENST00000640900 GCHFRP30047 84 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 ZNF767PQ75MW2 155 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 FAM213BQ8TBF2 198 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 FAM110AQ9BQ89 295 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 PAXXQ9BUH6 204 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 MS4A6AQ9H2W1 248 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 NRN1Q9NPD7 142 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 C19orf73Q9NVV2 129 aa6.82□□□□□ -1.32
SCARB2-225ENST00000640900 ZNF705EA8MWA4 302 aaPredicted RBP6.81□□□□□ -1.32
SCARB2-225ENST00000640900 HMGB3O15347 200 aaKnown RBP6.81□□□□□ -1.32
SCARB2-225ENST00000640900 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 CCL20P78556 96 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 SAMD13Q5VXD3 122 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 LCN12Q6JVE5 192 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 LCN15Q6UWW0 184 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 LYPD1Q8N2G4 141 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 ARL6IP6Q8N6S5 226 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 DYNLRB2Q8TF09 96 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 SFT2D1Q8WV19 159 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 ZNF331Q9NQX6 463 aaPredicted RBP6.81□□□□□ -1.32
SCARB2-225ENST00000640900 TMEM167BQ9NRX6 74 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 UBQLN2Q9UHD9 624 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 ARL2-SNX15V9GYD0 113 aa6.81□□□□□ -1.32
SCARB2-225ENST00000640900 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 SLC17A3O00476 420 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 ISLRO14498 428 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 OR7C2O60412 319 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 OR10J4P0C629 311 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 PSMB3P49720 205 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 UBE2L3P68036 154 aaKnown RBP6.8□□□□□ -1.32
SCARB2-225ENST00000640900 CCDC28AQ8IWP9 274 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 CLEC5AQ9NY25 188 aa6.8□□□□□ -1.32
SCARB2-225ENST00000640900 NDUFS6O75380 124 aaKnown RBP6.79□□□□□ -1.32
SCARB2-225ENST00000640900 HBE1P02100 147 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 ATF4P18848 351 aaPredicted RBP6.79□□□□□ -1.32
SCARB2-225ENST00000640900 FGF8P55075 233 aaPredicted RBP6.79□□□□□ -1.32
SCARB2-225ENST00000640900 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 CLLU1Q5K131 121 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 RBPMS2Q6ZRY4 209 aaKnown RBP6.79□□□□□ -1.32
SCARB2-225ENST00000640900 Q8N1Y9 231 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
SCARB2-225ENST00000640900 C20orf173Q96LM9 149 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 SLC50A1Q9BRV3 221 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 SELENOKQ9Y6D0 94 aa6.79□□□□□ -1.32
SCARB2-225ENST00000640900 OR4C46A6NHA9 309 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 FAM74A7A6NL05 159 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 A8MTW9 85 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 GGTLC3B5MD39 225 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 G3V4G9 280 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 PPT1P50897 306 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 PAFAH1B2P68402 229 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 PSG9Q00887 426 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 NKX6-2Q9C056 277 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-225ENST00000640900 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
SCARB2-225ENST00000640900 YTHDF2Q9Y5A9 579 aaKnown RBP6.78□□□□□ -1.32
SCARB2-225ENST00000640900 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 TEX46H3BTG2 121 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 H3BTX0 84 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
SCARB2-225ENST00000640900 CMC4P56277 68 aaPredicted RBP6.77□□□□□ -1.33
SCARB2-225ENST00000640900 PSG3Q16557 428 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 GBGT1Q8N5D6 347 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 CLUHP3Q96NS8 147 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 Q9H3A6 140 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 MED9Q9NWA0 146 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 ZMAT5Q9UDW3 170 aaKnown RBP6.77□□□□□ -1.33
SCARB2-225ENST00000640900 PRELID1Q9Y255 219 aa6.77□□□□□ -1.33
SCARB2-225ENST00000640900 IGKV3-7A0A075B6H7 116 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 DNASE2O00115 360 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-225ENST00000640900 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 TAGLN2P37802 199 aaKnown RBP6.76□□□□□ -1.33
SCARB2-225ENST00000640900 ID1P41134 155 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 RANP62826 216 aaKnown RBP6.76□□□□□ -1.33
SCARB2-225ENST00000640900 RPL11P62913 178 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms