RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 H3BTX0 84 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 ADIPOQQ15848 244 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 FER1L6-AS1Q8NA97 138 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 FAM167A-AS1Q96KT0 104 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 OR2J3O76001 311 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 SPANXN1Q5VSR9 72 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 DKK4Q9UBT3 224 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 FAM215AQ9Y5M1 114 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 OOSP1A8MZH6 123 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM11P17152 192 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 SPACA3Q8IXA5 215 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 VKORC1Q9BQB6 163 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 SLC50A1Q9BRV3 221 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 SMPXQ9UHP9 88 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 IGLC7A0M8Q6 106 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 LINC00479Q96M42 142 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 OR5A1Q8NGJ0 315 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 CCL21O00585 134 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 FCER1GP30273 86 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 PHLDA3Q9Y5J5 127 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 C7orf71A4D174 169 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 HERVK_113P61574 105 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 HSD52Q0P140 79 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 LCN12Q6JVE5 192 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 ABHD17AQ96GS6 310 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 DCAF16Q9NXF7 216 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 SMIM13P0DJ93 91 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 KLF12Q9Y4X4 402 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 ACANP16112 2415 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 TRAV8-1A0A0A6YYK1 113 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV1-24A0A0C4DH33 117 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 MYOD1P15172 320 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 TFPI2P48307 235 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 IGKV1OR2-108A0A075B7D4 117 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 D6R8Y8 96 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 CRXO43186 299 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-210ENST00000640652 CEACAM8P31997 349 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-210ENST00000640652 C10orf55Q5SWW7 151 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 NEU4Q8WWR8 484 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-210ENST00000640652 FLNAP21333 2647 aaKnown RBP4.47□□□□□ -1.69
SCN3A-210ENST00000640652 C5orf64Q2M2E5 130 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 PSG8Q9UQ74 426 aa4.47□□□□□ -1.69
SCN3A-210ENST00000640652 A0A1W2PNU3 283 aaPredicted RBP4.46□□□□□ -1.69
SCN3A-210ENST00000640652 NDUFB8O95169 186 aa4.46□□□□□ -1.69
SCN3A-210ENST00000640652 C16orf92Q96LL3 132 aa4.46□□□□□ -1.69
SCN3A-210ENST00000640652 TRBV19A0A075B6N1 114 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 CACNG7P62955 275 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 OR10J6PQ8NGY7 276 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 GP9P14770 177 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 PAX1P15863 534 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 ARL6IP6Q8N6S5 226 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 TIMM23O14925 209 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 MINOS1Q5TGZ0 78 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 MINOS1-NBL1R4GNA1 71 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 PLNP26678 52 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 LEPP41159 167 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 SFTPCP11686 197 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 SCGB1D4Q6XE38 83 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 DPF1Q92782 380 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 ID1P41134 155 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 TDRG1Q3Y452 100 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
SCN3A-210ENST00000640652 SH2D7A6NKC9 451 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-210ENST00000640652 FNDC4Q9H6D8 234 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF841Q6ZN19 808 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 FABP5P3A8MUU1 101 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 CGB3P0DN86 165 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 CGB7P0DN87 165 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 ATP5G2Q06055 141 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 LAGE3Q14657 143 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 C15orf32Q32M92 178 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 HIST1H4GQ99525 98 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 CHD6Q8TD26 2715 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 H3BRN7 92 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 PLP1P60201 277 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 C21orf62-AS1Q17RA5 79 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 MPV17L2Q567V2 206 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 NPSP0C0P6 89 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 LOXP28300 417 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-210ENST00000640652 UQCRFS1P47985 274 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 MUC21Q5SSG8 566 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 UNQ5815/PRO19632Q6UWF5 114 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 ZC2HC1AQ96GY0 325 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 LINC01549A6NIU2 74 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 NPIPB5A8MRT5 1133 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 COX8AP10176 69 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 ORMDL2Q53FV1 153 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 LDLRAD2Q5SZI1 272 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 DUX4L9Q6RFH8 374 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-210ENST00000640652 STPG4Q8N801 248 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 IFI27L1Q96BM0 104 aa4.45□□□□□ -1.7
SCN3A-210ENST00000640652 TRBV7-1A0A0A6YYK4 115 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 GCSHP23434 173 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 IFI27P40305 119 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 VMO1Q7Z5L0 202 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 TRBV6-1A0A0K0K1D8 114 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms