RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CD3DP04234 171 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 IGLC1P0CG04 106 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 MYOD1P15172 320 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 RPS27P42677 84 aaKnown RBP4.94□□□□□ -1.62
RTTN-215ENST00000639487 RPL30P62888 115 aaKnown RBP4.94□□□□□ -1.62
RTTN-215ENST00000639487 SERF2P84101 59 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 RPL7L1Q6DKI1 246 aaKnown RBP4.94□□□□□ -1.62
RTTN-215ENST00000639487 Q6ZN92 141 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 TBC1D26Q86UD7 250 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 RPEQ96AT9 228 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 SEC16AO15027 2179 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 TINCRA0A1B0GVN0 87 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 OR7C1O76099 320 aaPredicted RBP4.94□□□□□ -1.62
RTTN-215ENST00000639487 SAA1P0DJI8 122 aaPredicted RBP4.94□□□□□ -1.62
RTTN-215ENST00000639487 NTF3P20783 257 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 ELOBQ15370 118 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 IAH1Q2TAA2 248 aaPredicted RBP4.94□□□□□ -1.62
RTTN-215ENST00000639487 ZNF709Q8N972 641 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 SPATA25Q9BR10 227 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 OVOL2Q9BRP0 275 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 PEMTQ9UBM1 199 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 WDR83OSQ9Y284 106 aa4.94□□□□□ -1.62
RTTN-215ENST00000639487 FABP5P3A8MUU1 101 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 H0YIZ8 118 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 ZNHIT1O43257 154 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 SNCAP37840 140 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 FAM162BQ5T6X4 162 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 TMEM78Q5T7P6 136 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 TEX43Q6ZNM6 134 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 MBD3L1Q8WWY6 194 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 C11orf52Q96A22 123 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 UQCR10Q9UDW1 63 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 LINC01619G3V211 115 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 LINC00694P0DN24 101 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 RPL7P18124 248 aaKnown RBP4.93□□□□□ -1.62
RTTN-215ENST00000639487 BTNL8Q6UX41 500 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 SGPP2Q8IWX5 399 aa4.93□□□□□ -1.62
RTTN-215ENST00000639487 RCL1Q9Y2P8 373 aaKnown RBP4.93□□□□□ -1.62
RTTN-215ENST00000639487 LSM5Q9Y4Y9 91 aaKnown RBP4.93□□□□□ -1.62
RTTN-215ENST00000639487 M0R2Z0 102 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 SIRPB1O00241 398 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 CAMPP49913 170 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 PSG9Q00887 426 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 DNAJC30Q96LL9 226 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 CCDC140Q96MF4 163 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 GPER1Q99527 375 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 KLF12Q9Y4X4 402 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 DNAJC13O75165 2243 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.92□□□□□ -1.621e-5■■■■□ 21.5
RTTN-215ENST00000639487 TRAV40A0A0B4J280 105 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 TMEM189A5PLL7 270 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 HOXA3O43365 443 aaPredicted RBP4.92□□□□□ -1.62
RTTN-215ENST00000639487 C6orf226Q5I0X4 101 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 H2BFWTQ7Z2G1 175 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 OR4X2Q8NGF9 303 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 RARRES2Q99969 163 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 GAGE12JA6NER3 117 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 SRRM4A7MD48 611 aaKnown RBP4.92□□□□□ -1.62
RTTN-215ENST00000639487 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 GAGE7O76087 117 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 GAGE12FP0CL80 117 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 GAGE12GP0CL81 117 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 GAGE12IP0CL82 117 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 CCL3L1P16619 93 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 RPL24P83731 157 aaKnown RBP4.92□□□□□ -1.62
RTTN-215ENST00000639487 GAGE4Q13068 117 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 COA6Q5JTJ3 125 aaKnown RBP4.92□□□□□ -1.62
RTTN-215ENST00000639487 MYO7BQ6PIF6 2116 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 NPVFQ9HCQ7 196 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 NSG2Q9Y328 171 aa4.92□□□□□ -1.62
RTTN-215ENST00000639487 IGHV4-4A0A075B6R2 117 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 IGHV3OR15-7A0A075B7D8 119 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 A0A1W2PP11 408 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 GAGE10A6NGK3 116 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 NPIPB6E9PJ23 425 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 TNFSF12O43508 249 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 ZNF415Q09FC8 603 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 PPP1R1AQ13522 171 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 FAM19A5Q7Z5A7 132 aaPredicted RBP4.91□□□□□ -1.62
RTTN-215ENST00000639487 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 RASL11BQ9BPW5 248 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 RNF126Q9BV68 326 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 SCRT1Q9BWW7 348 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 TRAV18A0A075B6X5 111 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 TCRBV4S1A1TA0A5B7 111 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 FCGR2CP31995 323 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 GNG4P50150 75 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 DUX3Q96PT4 197 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 OR2D2Q9H210 308 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 MAP1LC3AQ9H492 121 aa4.91□□□□□ -1.62
RTTN-215ENST00000639487 ZNF256Q9Y2P7 627 aaPredicted RBP4.91□□□□□ -1.62
RTTN-215ENST00000639487 PPP1CCP36873 323 aaKnown RBP4.9□□□□□ -1.62
RTTN-215ENST00000639487 RPL27AP46776 148 aaKnown RBP4.9□□□□□ -1.62
RTTN-215ENST00000639487 REG1BP48304 166 aa4.9□□□□□ -1.62
RTTN-215ENST00000639487 HERV-K104P61576 105 aa4.9□□□□□ -1.62
RTTN-215ENST00000639487 ANXA2RQ3ZCQ2 193 aa4.9□□□□□ -1.62
RTTN-215ENST00000639487 SRSF12Q8WXF0 261 aaKnown RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms