RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 SLC17A3O00476 420 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 HMGB3O15347 200 aaKnown RBP14.42□□□□□ -0.1
HLA-A-209ENST00000638375 OR7C2O60412 319 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 HIST1H1EP10412 219 aaKnown RBP14.42□□□□□ -0.1
HLA-A-209ENST00000638375 TAS2R45P59539 299 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 DEFB131AP59861 70 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 ZNF124Q15973 351 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 KHDC3LQ587J8 217 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 IGFL4Q6B9Z1 124 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 FXYD5Q96DB9 178 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 C16orf92Q96LL3 132 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 CITED4Q96RK1 184 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 PAXXQ9BUH6 204 aa14.42□□□□□ -0.1
HLA-A-209ENST00000638375 ACTR3CQ9C0K3 210 aaPredicted RBP14.42□□□□□ -0.1
HLA-A-209ENST00000638375 ISLRO14498 428 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 OR10J4P0C629 311 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 STAG3L2P0CL84 134 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 STAG3L3P0CL85 134 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 PSMB3P49720 205 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 PSMG4Q5JS54 123 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 LCN15Q6UWW0 184 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 APRG1Q8IVJ8 170 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 SAT2Q96F10 170 aaPredicted RBP14.41□□□□□ -0.1
HLA-A-209ENST00000638375 C20orf173Q96LM9 149 aa14.41□□□□□ -0.1
HLA-A-209ENST00000638375 IGHV4-30-4P0DP06 118 aa14.4□□□□□ -0.1
HLA-A-209ENST00000638375 ID1P41134 155 aa14.4□□□□□ -0.1
HLA-A-209ENST00000638375 FHITP49789 147 aa14.4□□□□□ -0.1
HLA-A-209ENST00000638375 CMC4P56277 68 aaPredicted RBP14.4□□□□□ -0.1
HLA-A-209ENST00000638375 SNRPD3P62318 126 aaKnown RBP14.4□□□□□ -0.1
HLA-A-209ENST00000638375 SAMD13Q5VXD3 122 aa14.4□□□□□ -0.1
HLA-A-209ENST00000638375 MRAPQ8TCY5 172 aa14.4□□□□□ -0.1
HLA-A-209ENST00000638375 RNF141Q8WVD5 230 aa14.4□□□□□ -0.1
HLA-A-209ENST00000638375 ZNF331Q9NQX6 463 aaPredicted RBP14.4□□□□□ -0.1
HLA-A-209ENST00000638375 TRBV19A0A075B6N1 114 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 CTXND1A0A1B0GTU2 59 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 NDUFB4O95168 129 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 HLA-DMBP28068 263 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 UBE2L3P68036 154 aaKnown RBP14.39□□□□□ -0.11
HLA-A-209ENST00000638375 GUK1Q16774 197 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 PQLC2Q6ZP29 291 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 RNF182Q8N6D2 247 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 BLNKQ8WV28 456 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 LINC00052Q96N35 136 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 SRD5A3Q9H8P0 318 aa14.39□□□□□ -0.11
HLA-A-209ENST00000638375 UMAD1C9J7I0 102 aa14.38□□□□□ -0.11
HLA-A-209ENST00000638375 NBEAP1P0C6P0 100 aa14.38□□□□□ -0.11
HLA-A-209ENST00000638375 ARL14EPLP0DKL9 152 aa14.38□□□□□ -0.11
HLA-A-209ENST00000638375 DEFB1P60022 68 aa14.38□□□□□ -0.11
HLA-A-209ENST00000638375 LRRC20Q8TCA0 184 aa14.38□□□□□ -0.11
HLA-A-209ENST00000638375 SLC50A1Q9BRV3 221 aa14.38□□□□□ -0.11
HLA-A-209ENST00000638375 FBN3Q75N90 2809 aa14.37□□□□□ -0.11
HLA-A-209ENST00000638375 MEGF8Q7Z7M0 2845 aa14.37□□□□□ -0.11
HLA-A-209ENST00000638375 A8MZ25 164 aa14.37□□□□□ -0.11
HLA-A-209ENST00000638375 ZNF253O75346 499 aa14.37□□□□□ -0.11
HLA-A-209ENST00000638375 PDE6HQ13956 83 aa14.37□□□□□ -0.11
HLA-A-209ENST00000638375 DEFB121Q5J5C9 76 aa14.37□□□□□ -0.11
HLA-A-209ENST00000638375 EIF5AL1Q6IS14 154 aaKnown RBP14.37□□□□□ -0.11
HLA-A-209ENST00000638375 KNCNA6PVL3 124 aa14.36□□□□□ -0.11
HLA-A-209ENST00000638375 FAM213BQ8TBF2 198 aa14.36□□□□□ -0.11
HLA-A-209ENST00000638375 PHYHIPLQ96FC7 376 aa14.36□□□□□ -0.11
HLA-A-209ENST00000638375 TUBA4BQ9H853 241 aa14.36□□□□□ -0.11
HLA-A-209ENST00000638375 RBMY1BA6NDE4 496 aaKnown RBP14.35□□□□□ -0.11
HLA-A-209ENST00000638375 RBMY1EA6NEQ0 496 aaKnown RBP14.35□□□□□ -0.11
HLA-A-209ENST00000638375 RBMY1DP0C7P1 496 aaKnown RBP14.35□□□□□ -0.11
HLA-A-209ENST00000638375 GCHFRP30047 84 aa14.35□□□□□ -0.11
HLA-A-209ENST00000638375 SULT1A2P50226 295 aa14.35□□□□□ -0.11
HLA-A-209ENST00000638375 PSG3Q16557 428 aa14.35□□□□□ -0.11
HLA-A-209ENST00000638375 DPPA3Q6W0C5 159 aa14.35□□□□□ -0.11
HLA-A-209ENST00000638375 MAP1LC3B2A6NCE7 125 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 CXorf1O96002 111 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 FRMD6-AS1P0C7T7 363 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 PRB4P10163 310 aaPredicted RBP14.34□□□□□ -0.11
HLA-A-209ENST00000638375 FGF8P55075 233 aaPredicted RBP14.34□□□□□ -0.11
HLA-A-209ENST00000638375 FAM74A1Q5RGS3 127 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 GDF5OSQ5U4N7 250 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 LINC00322Q6ZN03 302 aaPredicted RBP14.34□□□□□ -0.11
HLA-A-209ENST00000638375 EXOC3-AS1Q8N2X6 119 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 SUN5Q8TC36 379 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 MAP1LC3BQ9GZQ8 125 aa14.34□□□□□ -0.11
HLA-A-209ENST00000638375 F6UB75 175 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 PSG9Q00887 426 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 ACTL10Q5JWF8 245 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 ALKAL2Q6UX46 152 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 FOXI2Q6ZQN5 318 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 ZNF738Q8NE65 137 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 MBD3L1Q8WWY6 194 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 TMPRSS5Q9H3S3 457 aa14.33□□□□□ -0.12
HLA-A-209ENST00000638375 ZNF705FA8MVS1 300 aaPredicted RBP14.32□□□□□ -0.12
HLA-A-209ENST00000638375 RAB5CP51148 216 aa14.32□□□□□ -0.12
HLA-A-209ENST00000638375 SAV1Q9H4B6 383 aaPredicted RBP14.32□□□□□ -0.12
HLA-A-209ENST00000638375 CLEC5AQ9NY25 188 aa14.32□□□□□ -0.12
HLA-A-209ENST00000638375 PRKDCP78527 4128 aaKnown RBP14.31□□□□□ -0.12
HLA-A-209ENST00000638375 M0R3E3 92 aa14.31□□□□□ -0.12
HLA-A-209ENST00000638375 HLA-DRB4P13762 266 aa14.31□□□□□ -0.12
HLA-A-209ENST00000638375 RPL35AP18077 110 aaKnown RBP14.31□□□□□ -0.12
HLA-A-209ENST00000638375 RANP62826 216 aaKnown RBP14.31□□□□□ -0.12
HLA-A-209ENST00000638375 ICAM4Q14773 271 aa14.31□□□□□ -0.12
HLA-A-209ENST00000638375 TRPT1Q86TN4 253 aaKnown RBP14.31□□□□□ -0.12
HLA-A-209ENST00000638375 IQCF2Q8IXL9 164 aa14.31□□□□□ -0.12
HLA-A-209ENST00000638375 SFT2D1Q8WV19 159 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms