RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 RAB2BQ8WUD1 216 aa8.41□□□□□ -1.06
CACNA1A-250ENST00000637809 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
CACNA1A-250ENST00000637809 Q9H3A6 140 aa8.41□□□□□ -1.06
CACNA1A-250ENST00000637809 SCRT2Q9NQ03 307 aa8.41□□□□□ -1.06
CACNA1A-250ENST00000637809 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
CACNA1A-250ENST00000637809 TRAV26-1A0A087WT03 109 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 H7BYZ3 331 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 HOXA5P20719 270 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 FAUP35544 74 aaKnown RBP8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 CDKN1BP46527 198 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 POLR2GP62487 172 aaKnown RBP eCLIP8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 ID3Q02535 119 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 RXFP4Q8TDU9 374 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 RPUSD4Q96CM3 377 aaKnown RBP8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 ZNF503Q96F45 646 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 UPK3BQ9BT76 320 aa8.4□□□□□ -1.06
CACNA1A-250ENST00000637809 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 SMCO3A2RU48 225 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 K7EPK0 472 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 ZNF701M0R085 212 aaPredicted RBP8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 CCNKO75909 580 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 OR5G3P0C626 314 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 BTF3P20290 206 aaKnown RBP8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 M6PRP20645 277 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 TMBIM6P55061 237 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 SELENOTP62341 195 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 OR5I1Q13606 314 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 ESRGQ1W209 222 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 TTC32Q5I0X7 151 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 OR10J6PQ8NGY7 276 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 GNPNAT1Q96EK6 184 aaPredicted RBP8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 BCL7BQ9BQE9 202 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 SLC25A21Q9BQT8 299 aaPredicted RBP8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
CACNA1A-250ENST00000637809 A0A0J9YY99 117 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 PRAC2D3DTV9 90 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 ADAP1O75689 374 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 CXCL2P19875 107 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 AP3S2P59780 193 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 GFI1BQ5VTD9 330 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 TOMM5Q8N4H5 51 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 C20orf144Q9BQM9 153 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 ZNF331Q9NQX6 463 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 V9GYH0 126 aa8.38□□□□□ -1.07
CACNA1A-250ENST00000637809 A0A1W2PPQ1 181 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 FNDC10F2Z333 226 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 H3BNG1 76 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 DLK1P80370 383 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 SLC38A11Q08AI6 406 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 ZBTB8BQ8NAP8 495 aaPredicted RBP8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 LRRC20Q8TCA0 184 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 SMIM8Q96KF7 97 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 ARL6Q9H0F7 186 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 ARV1Q9H2C2 271 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 PSENENQ9NZ42 101 aa8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 MRPS16Q9Y3D3 137 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-250ENST00000637809 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 GAGE12BA1L429 117 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 C9orf170A2RU37 121 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 H3BMQ9 156 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 SLC17A3O00476 420 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 SSSCA1O60232 199 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 GAGE7O76087 117 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 SNRPCP09234 159 aaKnown RBP8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 RRAS2P62070 204 aaPredicted RBP8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 PYDC2Q56P42 97 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 MORN5Q5VZ52 161 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 LCN15Q6UWW0 184 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 MCFD2Q8NI22 146 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 DEDD2Q8WXF8 326 aa8.36□□□□□ -1.07
CACNA1A-250ENST00000637809 LINC00854A0A1B0GVQ3 168 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 METTL15P1P0C7V9 234 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 ANXA7P20073 488 aaKnown RBP8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 C4orf46Q504U0 113 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 LINC00305Q7Z4B0 112 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 S100A7AQ86SG5 101 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 NPVFQ9HCQ7 196 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 ZNF586Q9NXT0 402 aa8.35□□□□□ -1.07
CACNA1A-250ENST00000637809 H3BTX0 84 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 RLN2P04090 185 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 CT45A10P0DMU9 189 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 IGLC2P0DOY2 106 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 LINC00315P59091 139 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 ARL16Q0P5N6 197 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 CCDC28AQ8IWP9 274 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 TMEM37Q8WXS4 190 aa8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 SAT2Q96F10 170 aaPredicted RBP8.34□□□□□ -1.07
CACNA1A-250ENST00000637809 VSIG2Q96IQ7 327 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms