RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 Q6ZR03 302 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 GAFA1Q96PS6 74 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 DUX3Q96PT4 197 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 SH2D1AO60880 128 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 SRSF1Q07955 248 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN2A-216ENST00000637367 GAGE13Q4V321 117 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 PRSS57Q6UWY2 283 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 C1orf122Q6ZSJ8 110 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM158Q8WZ71 300 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 SIGMAR1Q99720 223 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 VCX2Q9H322 139 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 PLSCR4Q9NRQ2 329 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 CHTOPQ9Y3Y2 248 aaKnown RBP5.27□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM262E9PQX1 116 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 HOXA3O43365 443 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-216ENST00000637367 MMP23AO75900 390 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 PPBPP02775 128 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 PRTN3P24158 256 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 CNTFRP26992 372 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 PLA2G5P39877 138 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 ZNF474Q6S9Z5 364 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-216ENST00000637367 ZNF329Q86UD4 541 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 MS4A6AQ9H2W1 248 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 SIGLEC9Q9Y336 463 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 PLXNA4Q9HCM2 1894 aa5.27□□□□□ -1.57
SCN2A-216ENST00000637367 IGHV3-73A0A0B4J1V6 119 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM178BH3BS89 294 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 VWC2Q2TAL6 325 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 C14orf178Q8N769 122 aaPredicted RBP5.26□□□□□ -1.57
SCN2A-216ENST00000637367 MDS2Q8NDY4 140 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 MRPL27Q9P0M9 148 aaKnown RBP5.26□□□□□ -1.57
SCN2A-216ENST00000637367 CEP295Q9C0D2 2601 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 PRRC2CQ9Y520 2896 aaKnown RBP5.26□□□□□ -1.57
SCN2A-216ENST00000637367 A0A1W2PRX2 142 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 Q0VG73 95 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 TDRG1Q3Y452 100 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 C10orf126Q8N4M7 172 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 PIMREGQ9BSJ6 248 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 NUPR1O60356 82 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 ZNF134P52741 427 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 ERVK11-1P61568 191 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 PSG3Q16557 428 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 OR5A1Q8NGJ0 315 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 TRGV9Q99603 122 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 SLC50A1Q9BRV3 221 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 PIEZO1Q92508 2521 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 MED12LQ86YW9 2145 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 TRAV40A0A0B4J280 105 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 SRRM4A7MD48 611 aaKnown RBP5.26□□□□□ -1.57
SCN2A-216ENST00000637367 ZNF688P0C7X2 276 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 UCNP55089 124 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 ERCC8Q13216 396 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 BRD3OSQ6XYD6 125 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 OR9G4Q8NGQ1 327 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 TPSG1Q9NRR2 321 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 MOB4Q9Y3A3 225 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 LY96Q9Y6Y9 160 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 V9GYV3 84 aa5.26□□□□□ -1.57
SCN2A-216ENST00000637367 TRAV21A0A0B4J279 112 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 FAM231BA6NCW3 169 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 VDAC2P45880 294 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-216ENST00000637367 Q86TA4 180 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 FAM168AQ92567 244 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 LINC01587Q99440 93 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 THSD7BQ9C0I4 1608 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 ETV2O00321 342 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-216ENST00000637367 CKS1BP61024 79 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 SPACA3Q8IXA5 215 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM8BA6NDV4 472 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-216ENST00000637367 H7C1H1 209 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 PAX8Q06710 450 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 DIAPH2-AS1Q14236 149 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 CST9LQ9H4G1 147 aa5.25□□□□□ -1.57
SCN2A-216ENST00000637367 NAV2Q8IVL1 2488 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 TRBV7-9A0A0J9YWB2 115 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 YPEL3P61236 119 aaPredicted RBP5.24□□□□□ -1.57
SCN2A-216ENST00000637367 WT1-ASQ06250 92 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 LAGE3Q14657 143 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 ORMDL2Q53FV1 153 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 PSMG4Q5JS54 123 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 RNF182Q8N6D2 247 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 HIVEP2P31629 2446 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 PCNTO95613 3336 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 A8MWV9 139 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 SMAD7O15105 426 aaKnown RBP5.24□□□□□ -1.57
SCN2A-216ENST00000637367 TOMM40O96008 361 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 COL8A2P25067 703 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 PAX2Q02962 417 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 C5orf64Q2M2E5 130 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
SCN2A-216ENST00000637367 ANAPC13Q9BS18 74 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM14BQ9NUH8 114 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 CEP350Q5VT06 3117 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 PCDH15Q96QU1 1955 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 USP9XQ93008 2570 aaPredicted RBP5.24□□□□□ -1.57
SCN2A-216ENST00000637367 A0A087WWL8 130 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 CD5LO43866 347 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 CD28P10747 220 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms